Pairwise Alignments

Query, 295 a.a., farnesyl-diphosphate synthase from Pseudomonas syringae pv. syringae B728a

Subject, 305 a.a., Polyprenyl synthetase (NCBI) from Rhodospirillum rubrum S1H

 Score =  231 bits (590), Expect = 1e-65
 Identities = 139/287 (48%), Positives = 176/287 (61%), Gaps = 8/287 (2%)

Query: 13  VNAALDGLFKAP-GPELERLYQAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACA 71
           +N  L  L  A  GPE  R+  AMRY+ + GGKR+RP L   + +        A   A A
Sbjct: 21  INDHLSQLMPATDGPE-GRVVDAMRYAALEGGKRLRPFLVLQSAQLFSVSRACALNVAAA 79

Query: 72  VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTS 131
           +E+IH YSL+HDDLPAMD+DDLRRG+PT H+ +DE  AILAGD L + AF  +  P  T 
Sbjct: 80  IEMIHCYSLIHDDLPAMDNDDLRRGRPTVHRQYDEPTAILAGDALLTKAFEVIALPG-TH 138

Query: 132 RDAETRLQMVTALATAAGPAGMVGGQAIDL----GSVGLKLDQAALEYMHRHKTGALIEA 187
            D   R  +VT LA AAG  GMVGGQ IDL    G +   LD  A+  MH+ KTG LI  
Sbjct: 139 SDPAVRCDLVTELAIAAGAKGMVGGQMIDLMAERGLIDGALDVPAITRMHQLKTGRLISF 198

Query: 188 SVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIARDKP 247
           S   GA+  G A + +  AL  YA  +GLAFQ+ DD+LDVE DTATLGK  G D A  K 
Sbjct: 199 SSIAGAIL-GKAPRSQRQALFNYAHDLGLAFQIADDLLDVEGDTATLGKTAGKDEASGKS 257

Query: 248 TYPALLGLEAAKHYALELRDQALQALSPFDAAAEPLRQLARYIVERR 294
           T+ +LLGLE A+  A  L +QA+  L  FD  A+ LR +AR++V+R+
Sbjct: 258 TFVSLLGLERARDQADMLAEQAVNHLDAFDEKADLLRAVARFVVDRK 304