Pairwise Alignments

Query, 769 a.a., Radical SAM from Pseudomonas syringae pv. syringae B728a

Subject, 759 a.a., uncharacterized radical SAM protein YgiQ from Pseudomonas stutzeri RCH2

 Score = 1313 bits (3399), Expect = 0.0
 Identities = 637/769 (82%), Positives = 690/769 (89%), Gaps = 10/769 (1%)

Query: 1   MQSAKPLFDYPKYWAECFGPAPFLPMSREEMDLLGWDSCDIIIVTGDAYVDHPSFGMAII 60
           M + KPLFDYPKYWAECFGPAPFLPMSREEMD LGWDSCDIIIVTGDAYVDHPSFGMAII
Sbjct: 1   MHAVKPLFDYPKYWAECFGPAPFLPMSREEMDQLGWDSCDIIIVTGDAYVDHPSFGMAII 60

Query: 61  GRLLESQGFRVGIIAQPDWQSKDDFMKLGEPNLFFGVAAGNMDSMINRYTADKKIRSDDA 120
           GRLLE+QGFRVGII+QPDW SKDDFMKLGEPNLFFGVAAGNMDSMINRYTAD+K+RSDDA
Sbjct: 61  GRLLEAQGFRVGIISQPDWHSKDDFMKLGEPNLFFGVAAGNMDSMINRYTADRKVRSDDA 120

Query: 121 YTPGGMAGKRPDRASLVYSQRCKEAYKHVPIVLGGIEASLRRIAHYDYWQDKVRNSILID 180
           YT GG+AGKRPDRASLVYSQRCKEAYKHVP+VLGGIEASLRRIAHYDYW DKVR SIL+D
Sbjct: 121 YTAGGLAGKRPDRASLVYSQRCKEAYKHVPVVLGGIEASLRRIAHYDYWSDKVRRSILMD 180

Query: 181 ACADILLYGNAERAIVEVAQRLSYGHKIEDITDVRGTAFIRRDTPQGWYEVDSTRIDRPG 240
           A ADILLYGNAERAIVEVAQRL+ G  +E ITDVRGTAFIR+D P+GW+E+DSTRIDRPG
Sbjct: 181 ATADILLYGNAERAIVEVAQRLARGEPVEAITDVRGTAFIRKDAPEGWFEIDSTRIDRPG 240

Query: 241 KVDKIINPYVNTQDTQACAIEQEKGNVEDPNEAKVVQILASPRMTRDKTVIRLPSVEKVR 300
           K+DKIINPYVNTQD  ACAIE++KG  +DPNEA+ V++L  P++ RD+TVIRLPS EKVR
Sbjct: 241 KIDKIINPYVNTQDLSACAIEKDKGPQDDPNEARPVELLPHPKLERDRTVIRLPSFEKVR 300

Query: 301 NDAVLYAHANRVLHLETNPGNARALVQKHGDVDVWFNPPPIPMTTEEMDYVFGMPYARVP 360
           ND  LYAHANRVLHLETNPGNARALVQ+H D ++W NPPPIP+TTEEMDYVF  PYARVP
Sbjct: 301 NDPALYAHANRVLHLETNPGNARALVQRHDDRELWLNPPPIPLTTEEMDYVFAAPYARVP 360

Query: 361 HPAYGKEKIPAYDMIRFSVNIMRGCFGGCTFCSITEHEGRIIQNRSEESIIREIEEIRDK 420
           HPAY   KIPAY+MIRFSVNIMRGCFGGCTFCSITEHEGRIIQ+RS ESI+ EIEE+++ 
Sbjct: 361 HPAYNGAKIPAYEMIRFSVNIMRGCFGGCTFCSITEHEGRIIQSRSHESILHEIEEMKN- 419

Query: 421 VPGFTGVISDLGGPTANMYRIACKSPEIESACRKPSCVFPGICPNLNTDHSSLIQLYRSA 480
           VPGFTGV+SDLGGPTANMYR+ACKS EIE  CRKPSCVFPGIC NLNTDHSSLI+LYR A
Sbjct: 420 VPGFTGVVSDLGGPTANMYRLACKSHEIEKHCRKPSCVFPGICENLNTDHSSLIELYRKA 479

Query: 481 RALPGVKKILIASGLRYDLAVESPEYVKELVTHHVGGYLKIAPEHTEEGPLNQMMKPGIG 540
           RALPGVKKILIASGLRYDLAVESPEYVKELVTHHVGGYLKIAPEHTE GPL++MMKPGIG
Sbjct: 480 RALPGVKKILIASGLRYDLAVESPEYVKELVTHHVGGYLKIAPEHTERGPLDKMMKPGIG 539

Query: 541 SYDKFKRMFEKYTKEAGKEQYLIPYFIAAHPGTTDEDMMNLALWLKGNGFRADQVQAFYP 600
           SYD+FKRMFEKY+KEAGKEQYLIPYFIAAHPGTTDEDMMNLALWLK NGFRADQVQAFYP
Sbjct: 540 SYDRFKRMFEKYSKEAGKEQYLIPYFIAAHPGTTDEDMMNLALWLKANGFRADQVQAFYP 599

Query: 601 SPMATATAMYHSGKNPLRKVTYKSDAVTIVKSEAQRRLHKAFLRYHDPKGWPMLREALER 660
           SPMA+ATAMYH+GKNPLRKVTYKS+ VT+VKSE QRRLHKAFLRYHDPKGWP+LREAL R
Sbjct: 600 SPMASATAMYHTGKNPLRKVTYKSEGVTVVKSEEQRRLHKAFLRYHDPKGWPLLREALIR 659

Query: 661 MGRADLIGPGKDQLIPLHQPATDSYQSARRKNSTPAGSHKVAKNAKTTLIQTQHTGLPPR 720
           MGRADLIG GK QLIP HQPAT+ YQSARRKNSTP GS K  +  K   I TQH GLPPR
Sbjct: 660 MGRADLIGNGKHQLIPAHQPATEGYQSARRKNSTPVGSKKTGQGGK---ILTQHNGLPPR 716

Query: 721 GSDGSKPWDKREEAKAAAMARNKQAAKERMDAAKGKGTKPPKRKPVVPR 769
             DG+  WDKRE+AKAAA AR K    E+     GKG KP  ++PV PR
Sbjct: 717 SHDGN-AWDKREQAKAAAEARRK---AEKSGKPAGKGGKP--QRPVAPR 759