Pairwise Alignments

Query, 956 a.a., YD repeat protein from Pseudomonas syringae pv. syringae B728a

Subject, 1316 a.a., putative cell wall-associated protein precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 68.6 bits (166), Expect = 3e-15
 Identities = 119/519 (22%), Positives = 201/519 (38%), Gaps = 97/519 (18%)

Query: 241  TYDVSGQLKATRLRVMNGSDQVLLHGLMYDAHGRIESQTAGNGVISCASFDLADGRMSEL 300
            +Y+ +G+L  T ++++N  D   +   +YD  G I+S T  +G  +  + +  + R    
Sbjct: 712  SYNHAGRLSET-VQIVNEKDSTKM-SYLYDDLGNIKSLTRIDGTSTLTTTNTYNIRNWLT 769

Query: 301  ITYRPGVKQLQHLLYDYDPV-----GNVTRIRDEAQPARHCSGQRIDAVNEYEYDSLYQL 355
                P   Q  H  Y   P      GN++ +  +A        + I    +Y YD L +L
Sbjct: 770  SIESPLFSQTLH--YTDGPGTPQYGGNISSMTWKANK------ESITRNYQYSYDKLNRL 821

Query: 356  IRASGRETALAGIRPELPELARLPVDESQLLNYNQRYS-YDDAGNLLKLIHKGAQAYTRH 414
              A+  E + +                    ++N++ + YD  GN+  L   G    + +
Sbjct: 822  TSANYSEGSNSMTNTN---------------HFNEQVTGYDKHGNITGLKRYGQTGQSSY 866

Query: 415  MIVDTKSNRALPWSEGDAPPDFDKQFDANGNQQALVAGRALHWDSGNRLIKVDAVTRSEQ 474
             ++D                  D      GNQ   V   A      N     D V    +
Sbjct: 867  GLID------------------DLSLTYTGNQLKKVTDSATSSAYANGFEFKDGVNLDTE 908

Query: 475  PEDGEHYAYDASGQRLRKTAKAMTRTFQHQCD----VRYLPGLEIR-TNSATGERLEVIT 529
                  Y+YD  G   +   K ++    +  +    +++  G EI    SA G +L+   
Sbjct: 909  ------YSYDEDGNLTKDLNKNISDIQYNFLNLPRRIQFKDGSEISYLYSADGTKLQTTH 962

Query: 530  VYAGRTNVR--C--LHWREGKPD---------AIDNNQLRYSIGDHLGSSTLELDAQAKL 576
            + AG T     C  + +  G  D         +I + +  Y I DH G++ +       +
Sbjct: 963  IIAGNTTTTDYCGNVIYENGSRDKLLTEQGYFSIADKKFHYYIQDHQGNNRVVASQDGMI 1022

Query: 577  ISHEGYYPFGGTAWWAARSAVEASYKVIRYSGKERDS---TGLYYYGVRYYAPWLMRWMS 633
                 YYPFGG   +A+ S+V+      +Y+GKE D+     LY YG R Y P L RW +
Sbjct: 1023 EEVNHYYPFGGI--FASNSSVQP----FKYNGKELDTKNGLNLYDYGARQYDPVLGRWHT 1076

Query: 634  ADPLGD-VEGLNLYRMTRNNPVSRVDPE------GGQSIDFDGMTLISIGITIGVVAMGL 686
             D + +    ++ Y    NNP+  VDP       GG S     +   ++  T G  A  +
Sbjct: 1077 MDLMTEKYYKISPYTYCLNNPILLVDPNGMWPTWGGISRGLSNVFKGTLSFTNG-AARAM 1135

Query: 687  TTWALLAYTSWTRKNAKLKDYRAFSDSAASEFGLDSNEI 725
                LL  TS       L++   +S+++A   G D  +I
Sbjct: 1136 ADNILLGQTS-------LRETGIYSNASAYNAGQDVGDI 1167