Pairwise Alignments

Query, 1300 a.a., L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase from Pseudomonas syringae pv. syringae B728a

Subject, 1059 a.a., bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase (RefSeq) from Shewanella loihica PV-4

 Score =  900 bits (2326), Expect = 0.0
 Identities = 504/1037 (48%), Positives = 658/1037 (63%), Gaps = 37/1037 (3%)

Query: 72   LRAAITSAYRRPEPEVVPMLLEQARLSAPVAEATNKMAASIAEKLRNQKSAGGRAGIVQG 131
            L  AIT+ Y   E + +  L++    S    +   K A  +  K+R     G   GI   
Sbjct: 20   LFTAITNNYIVDEEQYLSELIKLVPSSDDEIQRITKRAHDLVHKVRQYDKKGLMVGI-DA 78

Query: 132  LLQEFSLSSQEGVALMCLAEALLRIPDKGTRDALIRDKISNGNWQPHLGNSPSLFVNAAT 191
             LQ++SL +QEG+ LMCLAEALLRIPD  T DALI DK+S   W  HL  S S  VNA+T
Sbjct: 79   FLQQYSLETQEGIILMCLAEALLRIPDAATADALIDDKLSGAKWDEHLSKSDSTLVNAST 138

Query: 192  WGLLLTGRLVATHN--EAGLTSSLSRIIGKSGEPMIRKGVDMAMRLMGEQFVTGETIGEA 249
            WGL+LTG++++     +   +S L+R++ + GEP+IR+ +  AM++MG+QFV G T+ EA
Sbjct: 139  WGLMLTGKIISLDKSIDGKPSSLLNRLVNRLGEPVIRQAMLAAMKIMGKQFVLGRTVQEA 198

Query: 250  LANASRFEAKGFRYSYDMLGEAALTEHDAQKYLASYEQAIHSIGKASHGRGIYEGPGISI 309
            L N++     G+ +SYDMLGEAALT  DAQKY   Y  AI ++G   +       P ISI
Sbjct: 199  LKNSTDKRKLGYTHSYDMLGEAALTMKDAQKYYQDYSNAIAALGAQQYDESEAPRPTISI 258

Query: 310  KLSALHPRYSRAQYERVMDELYPRLLSLTLLAKQYDIGLNIDAEEADRLELSLDLLERLC 369
            KLSALHPRY  A  +R M ELY  L+ L   A+  ++G++IDAEE DRLELSL L ++L 
Sbjct: 259  KLSALHPRYEVANEDRTMTELYDTLIKLVSQARSLNVGVSIDAEEVDRLELSLKLFQKLY 318

Query: 370  FEPQLTGWNGIGFVIQAYQKRCPYVIDYVIDLARRSRHRLMIRLVKGAYWDSEIKRAQVE 429
                  GW  +G V+QAY KR   V+ ++  LA+     + +RLVKGAYWDSE+K AQV 
Sbjct: 319  NSDAAKGWGLLGLVVQAYSKRALPVLCWITRLAKDQGDEIPVRLVKGAYWDSELKWAQVA 378

Query: 430  GLEGYPVYTRKVYTDVSYIACARKLL--AAPEVIYPQFATHNAHTLAAIYQIAGQNYYPG 487
            G  GYP++TRK  TDVSY+ACAR LL  A    IYPQFA+HNA T+AAI  +AG      
Sbjct: 379  GEGGYPLFTRKAGTDVSYLACARYLLSDATRGAIYPQFASHNAQTVAAITDMAGDRL--- 435

Query: 488  QYEFQCLHGMGEPLYEQVVGKVADGKLNRPCRVYAPVGTHETLLAYLVRRLLENGANTSF 547
             YEFQ LHGMGE LY+ ++ +     +    R+YAPVG H+ LL YLVRRLLENGANTSF
Sbjct: 436  -YEFQRLHGMGEELYDTLLAESGVSTV----RIYAPVGAHKDLLPYLVRRLLENGANTSF 490

Query: 548  VNRIADHSISIQELVADPVSQIERMATQEGGFGLPHPRIPLPRDLYGTERANSSGIDMAN 607
            V+++ D    I+ LV  P++ ++   T      L + +I  P D++G ER NS GI+M  
Sbjct: 491  VHKLVDPKTPIESLVVHPLTTLQSYKT------LANNKIVQPIDIFGAERKNSKGINMNI 544

Query: 608  EHRLASLSSALLATAHNDWKAAPMLGCPASAGTLSAALNPSDLRDVVGHVQEASLQDVDN 667
                    +AL       W A P++     +G      +P D   +VG V  A+ Q ++ 
Sbjct: 545  ISESEPFFAALDKFKDQQWSAGPIVNGETLSGETIEVKSPYDTTQIVGKVAFANNQAIEQ 604

Query: 668  AIQCALSAGPIWQATPPVERAAILERAADLMEAEIQPLMGLLVREAGKTFANAIAEVREA 727
            A+  A +A   W +TP   RA  L++ ADL+E   + L+ L  REAGK+  + I EVREA
Sbjct: 605  ALASAHNAFGSWCSTPVEVRANALQKLADLLEENREELIALCTREAGKSIQDGIDEVREA 664

Query: 728  VDFLRYYAVQARNDFTNDGHRP-------------LGPVVCISPWNFPLAIFSGQVAAAL 774
            VDF RYYAVQA+         P              G  VCISPWNFPLAIF GQV AAL
Sbjct: 665  VDFCRYYAVQAKKMMGKPELLPGPTGELNELFLQGRGVFVCISPWNFPLAIFLGQVTAAL 724

Query: 775  AAGNPVLAKPAEQTPLIAAQAVRLLLEAGIPEGVVQLLPGRGETVGAGLVGDERVKGVMF 834
            AAGN V+AKPAEQT ++  +AV+L  EAGIP+  +Q LPG G TVGA +  DER+ GV F
Sbjct: 725  AAGNTVVAKPAEQTSIVGYRAVQLAHEAGIPKEALQFLPGTGATVGATITADERIGGVCF 784

Query: 835  TGSTEVARLLQRNVAGRLDSQGRPIPLIAETGGQNAMIVDSSALTEQVVIDVVSSAFDSA 894
            TGST  A+ +   +A R    G  IPLIAETGGQNAM+VDS++  EQVV DVVSS+F SA
Sbjct: 785  TGSTVTAKRINLTLAQR---DGAIIPLIAETGGQNAMVVDSTSQPEQVVNDVVSSSFTSA 841

Query: 895  GQRCSALRVLCLQEDSADRVIEMLKGAMAENRLGNPERLSVDIGPVIDAEAKAGIEKHIQ 954
            GQRCSALRVL LQED ADRVI+++KGAM E  +GNP  +  D+GPVIDA AKA +  HI 
Sbjct: 842  GQRCSALRVLYLQEDIADRVIDVMKGAMDELTIGNPGSVKTDVGPVIDATAKANLNAHID 901

Query: 955  AMRDKGRTVYQVAIADSAELKRGTYVMPTLIELESFDELQREIFGPVLHVVRYKRKELGL 1014
             ++  GR + Q+ +    E   G +V PT +E++S   L++E FGP+LHV+RYK  +L  
Sbjct: 902  HIKQVGRLINQLELPAGTE--NGHFVAPTAVEIDSIKVLEKEHFGPILHVIRYKAADLPK 959

Query: 1015 LIDQINASGYGLTLGVHTRIDETIAKVIDNVNAGNVYVNRNIVGAVVGVQPFGGEGLSGT 1074
            +ID IN++G+GLTLG+H+R +    +V D VN GNVY+NRN +GAVVGVQPFGG+GLSGT
Sbjct: 960  VIDDINSTGFGLTLGIHSRNEGHALEVADKVNVGNVYINRNQIGAVVGVQPFGGQGLSGT 1019

Query: 1075 GPKAGGPLYLYRLLSTR 1091
            GPKAGGP YL R ++ +
Sbjct: 1020 GPKAGGPHYLTRFVTEK 1036



 Score = 33.1 bits (74), Expect = 1e-04
 Identities = 56/234 (23%), Positives = 92/234 (39%), Gaps = 41/234 (17%)

Query: 1101 VRSDALSAPDTRLREVLGKPLQALKAWAASNQQSDLDAL------CSQYAEQSQS--GIT 1152
            VR++AL      L E   + +      A  + Q  +D +      C  YA Q++   G  
Sbjct: 623  VRANALQKLADLLEENREELIALCTREAGKSIQDGIDEVREAVDFCRYYAVQAKKMMGKP 682

Query: 1153 RQLAGPTGERNSYAILPREHVLCLADDENDLLI---QLAAVLAVGSSAVWPETD------ 1203
              L GPTGE N   +  R   +C++     L I   Q+ A LA G++ V    +      
Sbjct: 683  ELLPGPTGELNELFLQGRGVFVCISPWNFPLAIFLGQVTAALAAGNTVVAKPAEQTSIVG 742

Query: 1204 ---IGKPLRARLPKDVQARIKLIPDW--------AKDEVIFDAVLHHGDSDQLRAICQQI 1252
               +     A +PK+    ++ +P            DE I   V   G +   + I   +
Sbjct: 743  YRAVQLAHEAGIPKEA---LQFLPGTGATVGATITADERI-GGVCFTGSTVTAKRINLTL 798

Query: 1253 AQRSGAIV-------GVNGLSHGETNVPLERLVIERALSVNTAAAGGNASLMTI 1299
            AQR GAI+       G N +    T+ P +  V+   +S +  +AG   S + +
Sbjct: 799  AQRDGAIIPLIAETGGQNAMVVDSTSQPEQ--VVNDVVSSSFTSAGQRCSALRV 850



 Score = 28.1 bits (61), Expect = 0.004
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 9/53 (16%)

Query: 1257 GAIVGVN-----GLSHGETNVP----LERLVIERALSVNTAAAGGNASLMTIG 1300
            GA+VGV      GLS           L R V E+  + N  A GGNA+L+++G
Sbjct: 1003 GAVVGVQPFGGQGLSGTGPKAGGPHYLTRFVTEKTRTNNITAIGGNATLLSLG 1055