Pairwise Alignments

Query, 540 a.a., conserved hypothetical protein from Pseudomonas syringae pv. syringae B728a

Subject, 526 a.a., DamX, an inner membrane protein involved in bile resistance from Pseudomonas fluorescens FW300-N2E2

 Score =  773 bits (1997), Expect = 0.0
 Identities = 416/551 (75%), Positives = 457/551 (82%), Gaps = 36/551 (6%)

Query: 1   MTSLHADEAFLGHYQLSHDPFAARVPGFKFFPAQRKPVLGQLHHLARYSQLLLAVTGPQG 60
           MTSLHADEAFLGH+QLSHDPFA RVPGFKFFPAQRKPVLGQLHHLARYSQLLL VTGPQG
Sbjct: 1   MTSLHADEAFLGHFQLSHDPFAPRVPGFKFFPAQRKPVLGQLHHLARYSQLLLVVTGPQG 60

Query: 61  SGKTLLRQALVASTNKQSVQSVVISARGAGDAAGVLQQVAQALSVAQAEMQSILSQVVQL 120
           SGKTLLRQALVASTNKQSVQSVV+SARGAGDAAGVL+QVAQAL+VAQAE+ ++L Q+VQL
Sbjct: 61  SGKTLLRQALVASTNKQSVQSVVVSARGAGDAAGVLRQVAQALNVAQAEIGAVLDQIVQL 120

Query: 121 GLTGQEVYLLVDDAEQLGDSALEALLGLAAGTPEGRPHVFLFGEPSLLDRLDQMCADLQG 180
            LTGQEVYLLVDDAEQL +SALEALL LAAG PEGRPHVFLFGE SL+  L+Q+      
Sbjct: 121 ALTGQEVYLLVDDAEQLDESALEALLALAAGAPEGRPHVFLFGESSLIADLEQL------ 174

Query: 181 DVEGERFHVIELQPYTEEETREYLAQRLEGAGQGIALFTADQITDIHEQSDGWPGAINQV 240
           ++E ERFHVIEL PYTEEETREYLAQRLEGAG+GI LFTADQI++IHE SDGWPG INQV
Sbjct: 175 NLEEERFHVIELAPYTEEETREYLAQRLEGAGRGIELFTADQISEIHESSDGWPGNINQV 234

Query: 241 ARDSMIEAMIASRSAVKRPSVGFKMPKKHVLALGAVVIVAVAAAVLIPGRGDKTGTPANA 300
           ARD++IE MIASRSAVKRPS+GF MPKKHVLA+ AVV+VAVAAA L+PGR     T   A
Sbjct: 235 ARDALIEVMIASRSAVKRPSMGFNMPKKHVLAISAVVVVAVAAAWLMPGRTKAPTT--GA 292

Query: 301 PASAQAQLPLGEGKPTAQQSNNGSPAIEFAGNSQPMPLPMNG-NQPVMRGPLAEAAGS-S 358
           PA+ QAQLPLG+G P   Q N G+PA+EFAGN+QPMPLP+ G +QPVMRGPLAEAAG  +
Sbjct: 293 PANEQAQLPLGQGTP---QPNGGAPAVEFAGNTQPMPLPLVGQSQPVMRGPLAEAAGGIT 349

Query: 359 DSDEDAVP--TGSPAQPPTVTTTAPPAGVPAGQAAAQTPRSSIPAPTPAPAPAAKPAPAQ 416
           + D+ A P    S   PPTVTTTAPP GVPAG             P P PAPAAKP PA 
Sbjct: 350 EGDDGAAPPVDDSSDVPPTVTTTAPPVGVPAG-------------PAPTPAPAAKPTPAP 396

Query: 417 TQVATAKPA--PAPAAK-----PAEKPAAAAAKPAAGGSWYSSQAPGHYVVQILGTSSEA 469
           TQVATAKPA  PAPAAK     PA KPAAA AK  AGGSWY+ QAPG+YVVQILGTSSEA
Sbjct: 397 TQVATAKPAPVPAPAAKPAAPAPAAKPAAAPAK-TAGGSWYAGQAPGNYVVQILGTSSEA 455

Query: 470 TAQAYVAEQGGEYRYFKKTLQGKPLYVVTYGNFPDRAAALAAIKVLPAKVQAGKPWPRTV 529
            AQ +V EQGGEYRYFKK L GKPLYV+TYG+F +R AA++AIK LPAKVQAGKPWPRTV
Sbjct: 456 AAQNFVKEQGGEYRYFKKVLNGKPLYVITYGSFANRDAAVSAIKALPAKVQAGKPWPRTV 515

Query: 530 ASVQQELGATR 540
           ASVQQEL ATR
Sbjct: 516 ASVQQELAATR 526