Pairwise Alignments

Query, 540 a.a., conserved hypothetical protein from Pseudomonas syringae pv. syringae B728a

Subject, 284 a.a., AAA ATPase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 59.3 bits (142), Expect = 2e-13
 Identities = 66/273 (24%), Positives = 116/273 (42%), Gaps = 24/273 (8%)

Query: 1   MTSLHADEAFLGHYQLSHDPFAARV-PGFKFFPAQRKPVLGQLHHLARYSQLLLAVTGPQ 59
           M+ L++D     ++ L+  PF     P F F+    K     L +       +  +TG  
Sbjct: 3   MSGLYSD-----YFGLTERPFKLLPDPDFLFWSKIHKRAYAVLEYGILSGAPITVLTGEV 57

Query: 60  GSGKTLLRQALVASTNKQSVQSVVISARGAGDAAGVLQQVAQALSVAQ-------AEMQS 112
           G+GKT L Q L+ S +      ++ +A+G      +LQ V  ALSV            Q 
Sbjct: 58  GAGKTTLLQRLLRSIDDTVTVGLISNAQGG--RGELLQWVLNALSVTSDGNGDYVCLFQR 115

Query: 113 ILSQVVQLGLTGQEVYLLVDDAEQLGDSALEALLGLAA--GTPEGRPHVFLFGEPSLLDR 170
           +   ++     G++V L++D+A+ L    LE L  L       +    + L G+P L   
Sbjct: 116 LQDFLIHEYSEGRKVILIIDEAQNLSPEGLEELRMLTNINSNKDEILQLVLVGQPQLRKM 175

Query: 171 LDQMCADLQGDVE--GERFHVIELQPYTEEETREYLAQRLEGAGQGIALFTADQITDIHE 228
           +  M  DLQ   +     +H+    P   +   EY+  R++ AG     FT   +  I++
Sbjct: 176 I--MHPDLQQFAQRVSAFYHI---PPMDRDTMGEYVQHRMKHAGGSGHEFTDQALDRIYQ 230

Query: 229 QSDGWPGAINQVARDSMIEAMIASRSAVKRPSV 261
            S+G P  +N++   +++     +R  V   +V
Sbjct: 231 ASEGVPRLVNKLCDFALLYTATENRDVVTASAV 263