Pairwise Alignments

Query, 354 a.a., Type IV pilus assembly protein PilM from Pseudomonas syringae pv. syringae B728a

Subject, 338 a.a., pilus assembly protein PilM from Vibrio cholerae E7946 ATCC 55056

 Score = 97.8 bits (242), Expect = 4e-25
 Identities = 82/339 (24%), Positives = 152/339 (44%), Gaps = 20/339 (5%)

Query: 14  GIDISSTSVKLLELSRSGTRYKVESYAVEPLPANAVVEKNIAELEGVGQALSRVLAKAKT 73
           GIDI   S+K   L   G  Y +  Y    + A+   + +  + + + + L  +      
Sbjct: 8   GIDIGHHSIKAAVLKPMGDTYALVGYEELLVTADIFTDNHTLDYQKIVKKLKELKKGLPL 67

Query: 74  SVKNVAVAVAGSAVITKTIEMDAGLSDDDMENQLKLEADQYIPYPLEEVAIDF-EVQGYS 132
               VA+A+  SAVI+K +++D+ L   ++E  +        P+P+EE+++DF +V   S
Sbjct: 68  FSHKVAIAIPDSAVISKVLQIDSDLEQRELEFAVYQAFSHQSPFPVEELSLDFVKVTEKS 127

Query: 133 VRNPERVEVLLAACRKENVEVREAALALAGLTARVVDVEAYALERSFGLLAAQLGNGHDE 192
           +         + A +K+ V+ R  A+  AG    ++DV+ ++L   + L +      +  
Sbjct: 128 LARSSTTTFQVYATKKDVVDSRLHAVKKAGFEPVLMDVQVHSLLHLWQLAS----RAYRR 183

Query: 193 LTVAVVDIGATMTTLSVLHHGRIIYTREQLFGGRQLTDEIQRRYGLSMEEAGLAKKQGGL 252
               +VDIG T ++L +    ++ + ++   G RQL  E                    L
Sbjct: 184 PDWMLVDIGYTQSSLCLDFPEKMPFYKDVPLGTRQLESE--------------PSAVNSL 229

Query: 253 PDDYVSEVLDPFKEALVQQVSRSLQFFFAAGQYNSVDHIMLAGGTASISGLEHLIQRRIG 312
               + +    F + LV +++R +Q F +     S+  + L+GG A++SGLE  + +R+ 
Sbjct: 230 NHPLLHDPTQRFIQELVDKIARQIQLFTSVHGTQSLGGLWLSGGGATLSGLEDALYQRLS 289

Query: 313 TPTMVANPFADMALSSKVNAGALASDAPALMIACGLALR 351
            P  V NPF+ +  ++         D      A GLALR
Sbjct: 290 LPCEVLNPFS-LFKNNVAKRKRPLVDGQRFSTAAGLALR 327