Pairwise Alignments

Query, 266 a.a., Sec-independent periplasmic protein translocase from Pseudomonas syringae pv. syringae B728a

Subject, 323 a.a., Sec-independent periplasmic protein translocase (NCBI) from Rhodospirillum rubrum S1H

 Score =  190 bits (482), Expect = 4e-53
 Identities = 104/269 (38%), Positives = 153/269 (56%), Gaps = 9/269 (3%)

Query: 4   DTPENDQQMPLISHLTELRTRLLRCVAAVFLIFAGLFYFTQKIYTLVSAPL-RVYLPEGA 62
           D+   D++MPLI HL ELR+RLL       + F   F + Q+IY ++  PL RV    G 
Sbjct: 11  DSDLEDKKMPLIDHLIELRSRLLWSTVFFLVAFFACFAYAQEIYNILVLPLARVMERVGG 70

Query: 63  T--MIATDVASPFITPFKLTMMVALFLSMPVILHQIWGFIAPGLYKHEKRVAVPLLVSSI 120
           +  MI T +   F T  K+    A+ LS P+I  QIW F+APGLY+HEKR  +P L+ S 
Sbjct: 71  SQRMIYTALTEAFFTYVKVGAFGAIVLSFPLIATQIWMFVAPGLYRHEKRAFLPFLIVSP 130

Query: 121 ILFYAGMAFAYFLVFPLIFHFFASV------TPEGVSMMTDIASYLDFVMTLFFAFGVAF 174
           +LF  G A  Y+LV P+ + F          T   + +   +  YL  VM L  AFG +F
Sbjct: 131 MLFILGAAMVYYLVMPMAWSFLLGFQTTREQTVLPIQLEAKVGEYLGLVMKLILAFGFSF 190

Query: 175 EIPVAVVLLVWIGIVDVKYLKKIRPYVIIGCFVVGMILTPPDIFSQTLLAVPMWLLFELG 234
           ++PVA+ L+  +G+V  + L K R Y I+  F    ++TPPDI SQ +LA+P+ +L+EL 
Sbjct: 191 QMPVALTLMARVGLVTSRGLAKARKYAIVAVFAGAAVITPPDIMSQVMLAIPLLVLYELS 250

Query: 235 VLCSTMIKKRGEHPDDEAEDADKQDQPPA 263
           ++ + M++K     DD+ E+ D  + PPA
Sbjct: 251 IVAARMVEKSKGIEDDDLENLDDDEPPPA 279