Pairwise Alignments

Query, 460 a.a., Multi antimicrobial extrusion protein MatE from Pseudomonas syringae pv. syringae B728a

Subject, 477 a.a., proton-coupled multidrug efflux MATE transporter PmpM from Pseudomonas aeruginosa PA14

 Score =  214 bits (545), Expect = 5e-60
 Identities = 148/465 (31%), Positives = 217/465 (46%), Gaps = 17/465 (3%)

Query: 8   ELWIILRLAGPLIASQMAHMLMVFTDTVMMGKIGPEALAGGGLGAATYSFVSFFCVGVMA 67
           EL  +L LA P++ +Q+A   M F D VM G+  P  LA   LG + +  +     G + 
Sbjct: 17  ELKELLTLAAPIMIAQLATTAMGFVDAVMAGRASPHDLAAVALGNSIWIPMFLLMTGTLL 76

Query: 68  AVGTLVSIRHGAGDTEGATRLTQAGLWLAWGMA-LVAALLLWNLEPILLQFGQAEANVHM 126
           A    V+ R+GAGD  G   L +  LWLA  +  L  A+L W  EPIL         +  
Sbjct: 77  ATTAKVAQRYGAGDQPGTGPLVRQALWLALLIGPLSGAVLWWLSEPILGLMKVRPELIGP 136

Query: 127 AAQFLITLPFALPGLLSFMALRGFTSALGRAGPVMTISLAGAAANFVLNYALIHQWLGLP 186
           +  +L  +    P    +  LR +T+ LGR  P M + + G   N  +NYALI+   G+P
Sbjct: 137 SLLYLKGIALGFPAAALYHVLRCYTNGLGRTRPSMVLGIGGLLLNIPINYALIYGHFGMP 196

Query: 187 NLGLMGIGLVTAIVTNCMALALALHIRLHPAYAAYPIRKGLSKLSRSHLGELWRLGLPIG 246
            +G  G G  T  V   M L +   +     Y A  +        R+ +G L  +GLPIG
Sbjct: 197 KMGGPGCGWATGSVMWFMFLGMLFWVNKASIYRASQLFSRWEWPDRATIGPLVAVGLPIG 256

Query: 247 GTYAVEVGLFTFAAFCMGAMGSTQMAAHQIALQTVSMAFMVPVGMSYAVTMRIGQHYGAG 306
                E  +F+  A  +G +    +A HQIAL   ++ FM+P  +  AVT+R+G + GAG
Sbjct: 257 IAVFAESSIFSVIALLIGGLDENVVAGHQIALNFSALVFMIPYSLGMAVTVRVGHNLGAG 316

Query: 307 NLLMVRMAGRLGIGFGGCVMLMFGLLFWLAPHLVIGLFLDINDPAFAEIVVLATKLLAIA 366
                R A  +G+        +   L  L    +  ++    DPA   ++ +A  L+  +
Sbjct: 317 LPRDARFAAGVGMAAALGYACVSASLMLLLREQIAAMYSP--DPA---VIAIAASLIVFS 371

Query: 367 ALFEFFDGTQTIAMGAIRGLKDARTTFLIGLGCYWLIAAPAAWLLG----FSTDAGASGV 422
           ALF+F D  Q  A GA+RG +D R T ++ L  YW I  P  + LG    F    G  G+
Sbjct: 372 ALFQFSDALQVTAAGALRGYQDTRVTMIMTLFAYWGIGLPVGYSLGLTDWFQEPTGPRGL 431

Query: 423 WWGLALGLFCSAVAL-------TYAFEWKTARLLRQDAAGLPVPG 460
           W GL +GL  +A+ L          F  +  RL R+DAA   V G
Sbjct: 432 WQGLVVGLTGAAIMLCIRLARSARRFIRQHERLQREDAAAASVLG 476