Pairwise Alignments

Query, 274 a.a., shikimate dehydrogenase from Pseudomonas syringae pv. syringae B728a

Subject, 271 a.a., shikimate 5-dehydrogenase from Herbaspirillum seropedicae SmR1

 Score =  301 bits (771), Expect = 1e-86
 Identities = 164/273 (60%), Positives = 198/273 (72%), Gaps = 4/273 (1%)

Query: 1   MDRYVVFGNPIGHSKSPLIHRLFAEQTGQTLDYQTSLAPLDDFTAFAQAFFQ-AGRGANV 59
           MD YVV GNPI HSKSP IH  FA QTGQ++ Y+  L PL  F A  Q F +  GRGAN+
Sbjct: 1   MDEYVVIGNPIAHSKSPDIHARFAAQTGQSMSYERLLVPLHGFKAAVQVFQRRGGRGANI 60

Query: 60  TVPFKEQAWRLADSLTQRAQRAGAVNTLSKLDDGTLLGDNTDGAGLVRDLTVNCGRSLRG 119
           TVPFK +A  LAD LT+RA+ AGAVNT  K ++G +LGDNTDGAGLV D+ VN G++L+G
Sbjct: 61  TVPFKLEAHALADQLTERARLAGAVNTF-KFEEGCILGDNTDGAGLVTDIMVNAGQALQG 119

Query: 120 QRILLLGAGGAVRGALEPLLGQQPAALVIANRTVEKAERLAQEFADLGPVFASSFDWLEE 179
           +RILLLGAGGA RGAL PLL Q+PA LV+ NRT  +AE LA +FA  GPV +++F  LE 
Sbjct: 120 RRILLLGAGGASRGALLPLLQQRPAELVVVNRTASRAEELATQFAAYGPVRSTTFAGLEG 179

Query: 180 SVDVIINATSASLAGELPPIAPSLIQPGVTFCYDMMYSNEPTAFCRWATEHGAAQAVDGL 239
           + DVI+NATSASL+ +LPP+ PS +    T  YDMMY   PT F + A +HG A   DGL
Sbjct: 180 AFDVIVNATSASLSDDLPPLPPS-VYGSETLAYDMMYGRGPTVFMQSAQQHG-AHVRDGL 237

Query: 240 GMLVEQAAEAFLLWRGVRPDSAPVLAELRRLLA 272
           GMLVEQAAEAF  WRGVRP +A V A LR+ L+
Sbjct: 238 GMLVEQAAEAFQWWRGVRPATAEVFASLRQQLS 270