Pairwise Alignments

Query, 407 a.a., ABC transporter permease from Synechocystis sp000284455 PCC 6803

Subject, 650 a.a., hypothetical protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  267 bits (682), Expect = 8e-76
 Identities = 166/404 (41%), Positives = 246/404 (60%), Gaps = 16/404 (3%)

Query: 4   FRESLKMATSMLLANKLRSSLTMLGIVIGNASVVAMLGIGQGAQELATSQLEDLGPNVLF 63
           F E+LKMA   L AN  R++LT+LG+VIG A+VV M+ IG+G+++   ++++ +G N+L 
Sbjct: 257 FGEALKMAGRSLRANIFRTALTLLGVVIGVAAVVTMMAIGEGSKQDVLTRIQSMGTNLLL 316

Query: 64  VLPGSQRNRRASFNLPKTLVLSDAEAIAGQVPSVAGVAPE-INRRLLVSHRNLNTNATIV 122
           V PG+   R +  ++  +L  +DAEA+A Q+  +A VAPE +   + V    ++   TI 
Sbjct: 317 VRPGAPGIRPSGTDV--SLTPTDAEAVA-QLAGMAAVAPERMASGITVRREGIDYRTTIN 373

Query: 123 GTTPEYPAIRNFSVAQGRFLNILDLERHRRVAVLGSEIADRLYQ-TQTPLGQNIRINNIT 181
           GT P Y A +++ +A G F +  DL+    VAVLG  +A  L+   + P+G    + N+ 
Sbjct: 374 GTWPAYAAAKDWPMAWGSFFDATDLQASAPVAVLGQTVAKNLFPGEEDPVGSYFLVRNVP 433

Query: 182 FEVIGVMETKGSS-LGSNQDEFIFIPLDTMVAQLVGRTSPYGIELSWINVKAKDGDSVGA 240
           F VIGV+E KG++  G +QD+ + IPL T  A++ G     G  LS +  + +D  ++  
Sbjct: 434 FLVIGVLEAKGATPFGQDQDDIVLIPLTTAFARVSG-----GRYLSSLTARVEDATTIDE 488

Query: 241 ATFQMENLLRLRHNIKNGEDDFGVSSAKQMLDIVNTITGGLTILLAAIAGISLIVGGIGV 300
           +   +E+LL+ RH    G+ DF V + + +L++V      LT+LL A+A ISL+VGGIGV
Sbjct: 489 SQAAIESLLQARH----GKVDFQVRNTQSLLEMVEKTQNSLTLLLGAVALISLLVGGIGV 544

Query: 301 MNIMLVSVTERTQEIGLRKALGAGEQDILSQFLIEAVIVSASGGVIGVVLGMAIVAIVGS 360
           MNIMLVSVTERT+EIG+R A GA   DIL QF  EAV V   GG+ GV LG+     V  
Sbjct: 545 MNIMLVSVTERTREIGIRLATGARASDILLQFNTEAVAVCGVGGLAGVGLGLGAALAVAE 604

Query: 361 LSPLITVISPAAVVVSLTISGSIGLFFGVVPARQAAKLDPIVAL 404
              L    +P   +V+   +   GL FG +PAR+AA+LDP+VAL
Sbjct: 605 FG-LPVRFTPGPPIVAFCCAFLTGLLFGYLPARKAARLDPVVAL 647