Pairwise Alignments

Query, 597 a.a., translational GTPase TypA from Synechocystis sp000284455 PCC 6803

Subject, 603 a.a., virulence regulator BipA (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  618 bits (1593), Expect = 0.0
 Identities = 315/585 (53%), Positives = 414/585 (70%), Gaps = 1/585 (0%)

Query: 5   IRNVAIIAHVDHGKTTLVDALLKQSGIFREGEDVPVCVMDSNDLERERGITILSKNTAVR 64
           +RN+AIIAHVDHGKTTLVD LL QSG      +    VMDSNDLE+ERGITIL+KNTA++
Sbjct: 5   LRNIAIIAHVDHGKTTLVDKLLSQSGTLATRGEATERVMDSNDLEKERGITILAKNTAIK 64

Query: 65  YQDTLINIVDTPGHADFGGEVERVLGMVDGCVLIVDANEGPMPQTRFVLKKALEKGLRPL 124
           + D  INIVDTPGHADFGGEVERVL MVD  +L+VDA +GPMPQTRFV KKA  +GL+P+
Sbjct: 65  WNDYRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKPI 124

Query: 125 VVVNKIDRPRADPNTAVDKVFDLFVELGADDDQCDFTTLFASGLGGFAKESLDDDSEDMK 184
           VV+NKIDRP A P+  +D+VFDLF  LGA D+Q DF  ++AS L GFA    D  SEDM 
Sbjct: 125 VVINKIDRPGARPDWVIDQVFDLFDNLGATDEQLDFPIVYASALNGFATLDPDVVSEDMT 184

Query: 185 PLFEAILHHVPPPAGDPNKPLQLQVTTLDYSDYLGRIIIGRIHNGTVKAGQQAALVKEDG 244
           PLF+ I+  V  P  D + P Q+Q++ LDY+ Y+G I +GRI+ G++K  QQ +++  DG
Sbjct: 185 PLFQTIVEKVSSPDADADGPFQMQISQLDYNSYVGVIGVGRINRGSIKTNQQVSVIGADG 244

Query: 245 SIAKGKVSKLLGFEGLNRIELPEASAGYIVAIAGFADANIGETLTCPDEPQALPLIKVDE 304
            +  GK+ ++LG+ GL R E+  A+AG IVAI G  +  I +T+      +A+P + VDE
Sbjct: 245 KVRNGKMGQVLGYMGLERTEVDVANAGDIVAITGLGELKISDTVCAAGNVEAMPPLSVDE 304

Query: 305 PTLQMTFSVNDSPFAGQEGKFVTSRQIRDRLNRELETNVALRVEDGESAEQFLVSGRGEL 364
           PTL MTF VN SPFAG+EGK+VTSR I +RL +EL  NVALRVE+ +S ++F VSGRGEL
Sbjct: 305 PTLTMTFQVNTSPFAGKEGKYVTSRNILERLQQELVHNVALRVEETDSPDRFAVSGRGEL 364

Query: 365 HLGILIETMRREGYEFQVAQPQVIYREVNGQPCEPVEYLVLDVPEAAVGACIERLGQRRG 424
           HL ILIE MRREGYE  V++P+VI + ++G+ CEP E L +DV E   G  IE+LG R+ 
Sbjct: 365 HLSILIENMRREGYELAVSRPEVILKTIDGELCEPFETLTVDVEEEHQGTVIEKLGIRKA 424

Query: 425 EMQDMQTSVNGRTQLEFVIPARGLLGFRGDFIRITRGEGIMNHSFLEYRP-MSGDLETRY 483
           EM+DMQ    GR +++FVIP+RGL+GF+ +F+  T G G++ HSF  Y P   GD+  R 
Sbjct: 425 EMKDMQLDGKGRVRVDFVIPSRGLIGFQTEFLTATSGTGLIYHSFDHYGPHKGGDIGQRA 484

Query: 484 NGVMVAFEEGVATFYAMKNAEDRGVFFITPGTKVYKGMIIGEHNRPQDIELNVCKTKQLT 543
           NGV+++   G A  +A+   +DRG  FI    +VY+G ++G H R  D+ +N  K KQLT
Sbjct: 485 NGVLISNATGKALTFALFGLQDRGRLFIGHAAEVYEGQVVGIHARSNDLTVNCLKGKQLT 544

Query: 544 NHRSATGDELVQLQAPEDMNLERALEYIGPDELVEITPESIRLRK 588
           N R++  DE   L  P  + LE+ALE+I  DELVE+TP+SIR+RK
Sbjct: 545 NMRASGTDEAQVLTTPITLTLEQALEFIDDDELVEVTPKSIRVRK 589