Pairwise Alignments

Query, 376 a.a., Secretion protein HlyD from Synechococcus elongatus PCC 7942

Subject, 364 a.a., efflux transporter, RND family, MFP subunit from Marinobacter adhaerens HP15

 Score =  119 bits (299), Expect = 1e-31
 Identities = 89/346 (25%), Positives = 161/346 (46%), Gaps = 29/346 (8%)

Query: 24  GVASCQGRQPAAFQGPPALPVDVTKATVETVNDLTEYLGALEATEQTILRPQIQGRIVSV 83
           G A+  GR+       PA  V+     +E V D+   +G+L+A     L  ++ GR+V +
Sbjct: 28  GTAAQSGRER------PASAVNTMLPQMEAVRDVVNAVGSLKALNAVELTTEVSGRVVEL 81

Query: 84  AVQPGQIVSVGQPMFVLDSEQVEADVAAANAEVARQEAQLRDAKITFERQKFLADQGVVP 143
            ++ G+ V  G  +  LD  Q  AD+          EAQL DA+   ER + L     + 
Sbjct: 82  NLETGRRVGQGDVLLRLDDRQAWADLQVI-------EAQLADARRQLERAQRLRSNNSIS 134

Query: 144 LQNLDNARRELQTAQAQLKAAQQNAVAKSVNVQYKTVRAPINGLVGDIRLKIGDFVDTGA 203
              +D  R  +  A+AQ ++AQ       V ++   + AP  G+VG   + +G ++  G 
Sbjct: 135 QSQVDQLRTSVDVAEAQRQSAQ-------VRLENHRIEAPFAGVVGLSDISVGAYITAGT 187

Query: 204 ELTTITRNNQLFINIPVPTVRIPQLRKGQPVKLLDPFSKNILATGAVDFVSPVVQQNLQT 263
            +TT+   +++ +   +P   + Q+  GQ V+   P   +   +G +  +   V +  ++
Sbjct: 188 SVTTLDTTDRMELGFSIPERFLGQVSLGQEVRGASPAYPDQTFSGQLVELGSRVSELSRS 247

Query: 264 VLVKVVVPNADGLIRNGQIVQSEIVWDRKEAVLVPTQAVTPLAGANFVYVVEPKPNSPDQ 323
           + V+ ++ N DGL+R GQ + + +   +++A+++P QAV       +V+V E        
Sbjct: 248 LPVRALIDNPDGLLRPGQFMSATLTLRQRQALVIPEQAVMIRGDEQYVFVAE-------D 300

Query: 324 FQVRQQKVELGSIFNNRYQIRSGLKPGETVATT--NLLSLTDKATV 367
              R+  V LGS      ++ SGL   + V  T  + LS  D+  V
Sbjct: 301 GVARRVSVSLGSRMPGFVEVSSGLSQEDPVIVTGQDRLSSGDRVRV 346