Pairwise Alignments

Query, 376 a.a., Secretion protein HlyD from Synechococcus elongatus PCC 7942

Subject, 560 a.a., RND transporter from Burkholderia phytofirmans PsJN

 Score =  132 bits (333), Expect = 2e-35
 Identities = 98/359 (27%), Positives = 178/359 (49%), Gaps = 24/359 (6%)

Query: 25  VASCQGRQPAAFQGPPALPVDVTKATVETVNDLTEYLGALEATEQTILRPQIQGRIVSVA 84
           ++ C  ++  A   PP + V V    +  V  + +Y+G  E+++Q  +R ++ G +    
Sbjct: 20  LSGCHEKEAPAAARPP-VNVGVVDIALRDVPVVFDYVGQTESSQQVEIRARVNGFLEKRV 78

Query: 85  VQPGQIVSVGQPMFVLDSEQVEADVAAANAEVARQEAQLRDAKITFERQKFLADQGVVPL 144
            Q G +V  G  MFV+D +  +A + AA AE A+Q+A+L  A+    R + L  +  +  
Sbjct: 79  YQEGSMVHQGDVMFVMDRKPFQASLDAARAEFAQQKARLDTAQANLNRVRPLVAKNALSQ 138

Query: 145 QNLDNARRELQTAQAQLKAAQQNAVAKSVNVQYKTVRAPINGLVGDIRLKIGDFVD-TGA 203
           ++LD++  + Q A A L+ A+ N  + ++N+ Y T+ AP+ GL    + + G ++D T +
Sbjct: 139 KDLDDSIGQQQAAAAALEQARANVTSANLNLGYTTITAPVTGLSSFAKKQDGSYIDSTNS 198

Query: 204 ELTTITRNNQLFINIPVP--------------TVRIPQLRKGQPVKLLDPFSKNILATGA 249
            LT + + + ++IN  +               T+++PQ+   + V +L   S      G 
Sbjct: 199 LLTYVAKLDPMWINFSLSENEMLQLRTQTANGTLKLPQIDDLEAVIVLADGS-IYPQRGH 257

Query: 250 VDFVSPVVQQNLQTVLVKVVVPNADGLIRNGQIVQSEIVW-DRKEAVLVPTQAVTPLAGA 308
           + F    +     T L++  VPN DG +R GQ V+ +++  +R  AV VP  A+      
Sbjct: 258 IAFRDASLSSETGTYLIRAAVPNPDGALRPGQFVRIKLLGAERSAAVAVPQGAILQGPRG 317

Query: 309 NFVYVVEPKPNSPDQFQVRQQKVELGSIFNNRYQIRSGLKPGETVATTNLLSLTDKATV 367
            +V+ V+ K N     + +Q+ +E G    N + + SGL+ G+ V   N L L   A V
Sbjct: 318 EYVWTVD-KDN-----KAQQRAIETGEWNGNDWVVNSGLRVGDRVVIDNTLRLMPGAAV 370