Pairwise Alignments

Query, 244 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase from Synechococcus elongatus PCC 7942

Subject, 245 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase (RefSeq) from Shewanella loihica PV-4

 Score =  177 bits (449), Expect = 2e-49
 Identities = 99/242 (40%), Positives = 143/242 (59%), Gaps = 6/242 (2%)

Query: 2   VRILAVIPARYASERLPGKVLLPIAGRPMLQWVYEATIASNVFDQVAIATEDPRVVEAAA 61
           + +  +IPARY S R PGK L PI G+PM+Q VYE    +     + +AT+D R+ EA  
Sbjct: 1   MNVTLLIPARYGSSRFPGKPLAPINGKPMIQHVYERAALAKGLTAIYVATDDLRIKEAVE 60

Query: 62  AFGAEAILTSADLASGTDRVAEA--SLHFPDCKVIANVQGDQPFVTPGLLQALVSPY--R 117
           AFG + ++T A+ ASGTDR+ +A   L   D  ++ N+QGDQP + P  ++ +++ +   
Sbjct: 61  AFGGKVVMTDANAASGTDRIEDAITQLGLADDDLVINLQGDQPLIDPISIEQIITLFERH 120

Query: 118 AGELPEMTTVGGPYDPAQDADDPNTVKVVCDQRGNALYFSRSAIPYPRTVVHDLPVYHHF 177
            GE   M T+G       + +DP  VK+V D + NALYFSR+ IP+ R    D PVY H 
Sbjct: 121 PGEF-GMATLGYEITEEHELNDPKHVKMVFDNQFNALYFSRARIPFGRD-TDDYPVYKHL 178

Query: 178 GLYAFRRDFLAQYRQLPPTPLERCESLEQLRVLEQGYRIRVVPCADKVIEVNTADDLERA 237
           G+YA+ R+F+  + +LP   LE  E LEQLR LE G+ I+V   A    EV+T +D+   
Sbjct: 179 GVYAYTREFVRTFNKLPLGRLEDLEKLEQLRALEHGHTIKVAISAFDSPEVDTPEDIRIC 238

Query: 238 NA 239
            A
Sbjct: 239 EA 240