Pairwise Alignments

Query, 156 a.a., RNA methyltransferase TrmH, group 2 from Synechococcus elongatus PCC 7942

Subject, 154 a.a., Predicted rRNA methylase (SpoU class) from Sphingomonas koreensis DSMZ 15582

 Score =  122 bits (305), Expect = 3e-33
 Identities = 69/153 (45%), Positives = 92/153 (60%), Gaps = 4/153 (2%)

Query: 3   QVVLYQPEIPPNTGNIARTCAATDTPLHLIEPLGFELSDRYLKRAGLDYWPYVQLTTHPD 62
           +V L+QP+I  N G + R  A   TP+ LIEP+GF   D+ + RAG+DY  +V +T H D
Sbjct: 2   RVALFQPDIAGNVGAVLRIGACLATPIDLIEPMGFAWDDKRVARAGMDYIGHVAITRHAD 61

Query: 63  WSVFRQQQQQQGGRLIAFTTKGELNYLDCDFQATDWLLFGRETSGLPEDVLASCDHRVRI 122
           W  F +Q +   GR++  TT+G     D  F+  D LLFG E++G+PE V A  D RV I
Sbjct: 62  WDAFERQAK---GRIVLLTTRGATPLHDFAFEDDDILLFGSESAGVPEQVHARADARVVI 118

Query: 123 PTPQAGVRSLNLSVSVAIGLFEARRQVYFATNP 155
           P   AG+RS+NLSVSV I L E  RQ     +P
Sbjct: 119 PM-AAGLRSMNLSVSVGIVLAEGLRQTAHWPSP 150