Pairwise Alignments

Query, 299 a.a., dihydrodipicolinate synthase from Synechococcus elongatus PCC 7942

Subject, 294 a.a., dihydrodipicolinate synthase (RefSeq) from Shewanella loihica PV-4

 Score =  216 bits (550), Expect = 5e-61
 Identities = 117/287 (40%), Positives = 167/287 (58%), Gaps = 2/287 (0%)

Query: 11  ITAMITPFNAEGQVAYDIAQSLAVHLVEQGSDGLVICGTTGESPTLTWEEELQLFRAVKE 70
           I A+ITP N +G V Y   + L  + +EQG+D +V  GTTGES TL   E +++     +
Sbjct: 6   IVALITPMNRDGSVDYASLEKLVEYHIEQGTDAIVAVGTTGESATLPLSEHIEVVAHTVK 65

Query: 71  AVGDRAAVIAGTGSNCTREAIAATQSAATLGLNGSLQVVPYYNKPPQEGLYAHFRAIAEA 130
               R  VI G G+N T EAI  T++ A LG+   L V PYYNKP  +GL AH+ A+A A
Sbjct: 66  FAAGRVPVIGGNGANATAEAIELTKAQANLGVAAMLGVTPYYNKPTPKGLVAHYSAVA-A 124

Query: 131 CPDLPLMLYNIPGRTGQSLQPETVARLASLPNVVAIKAASGNVEEVSALRQLLPDSFAIY 190
             D+P +LYN+PGRT   + PETVA+L  +PN++ +K A+G++  V+ LR+L  D F +Y
Sbjct: 125 ATDIPQILYNVPGRTSVDMLPETVAQLVDVPNIIGVKEATGDLSRVARLRELCGDDFMLY 184

Query: 191 SGDDSLTLPMLAVGAQGVVSVASHLVGPQLQALIQAFEAGNVARAQQLHHQLYPLFKALF 250
           SGDD+     L +G  GV+SVA+++V  Q + +  A   G++  A +    +  LF ALF
Sbjct: 185 SGDDATAREFLTLGGNGVISVANNIVPKQFKLMCDAALKGDLEGALKAEAPMKDLFSALF 244

Query: 251 LTTNPIPVRAAMELLGW-SIGLPRLPLVPASAEIRQALASCLTELGL 296
              NPIPV+ A   +G  S G  RLPL   S +    L   +   G+
Sbjct: 245 CEANPIPVKWAAHRMGLISQGHIRLPLTELSEQYHGLLLEAMKNAGI 291