Pairwise Alignments

Query, 314 a.a., GDP-fucose synthetase NAD dependent epimerase/dehydratase from Synechococcus elongatus PCC 7942

Subject, 365 a.a., dTDP-glucose 4,6 dehydratase (RefSeq) from Shewanella loihica PV-4

 Score = 85.1 bits (209), Expect = 2e-21
 Identities = 90/354 (25%), Positives = 159/354 (44%), Gaps = 56/354 (15%)

Query: 6   RIFVAGHRGLVGAAIVRRL---------------QAAGYQNLVTASRS------QVDLRD 44
           +I V G  G +G+A+VR +                A   ++LV+  +       QVD+ D
Sbjct: 2   KILVTGGAGFIGSAVVRHIINNTQDSVINVDKLTYAGNLESLVSVDKDERYAFEQVDICD 61

Query: 45  AIAVDRFFAEYQPDYVFLAAAKVGGIYANDIYPADFIRDNLQIQTNVIDA---------A 95
              +DR F E++PD V   AA+   +  +   PADFI+ N+     +++A         A
Sbjct: 62  RAELDRVFNEHKPDAVMHLAAE-SHVDRSITGPADFIQTNIVGTYTLLEATRAYWNELPA 120

Query: 96  YRQGCQKLLFLGSTCIYPKFA-PQPM--PESCLLTGELEP--TNEWYAIAKIAGIKLCQA 150
            ++   +   + +  +Y     P  +  P+   L  E  P   +  Y+ +K +   L +A
Sbjct: 121 DKKTAFRFHHISTDEVYGDLLHPDEVQNPDELPLFTETTPYAPSSPYSASKASSDHLVRA 180

Query: 151 YRKQYGFNAISLMPTNLYGPEDNFH-PENSHVLPALIRRFLEAKEANQAEVVCWGTGSPR 209
           + + YG   I    +N YGP   +H PE   ++P +I   LE K      +  +G G   
Sbjct: 181 WLRTYGLPTIVTNCSNNYGP---YHFPEK--LIPLVILNALEGKS-----LPVYGKGDQI 230

Query: 210 REFLYVDDLADACLFLMQTYNEPEIVNVGVGHDISIRE--------LAELVAQTVGYGGA 261
           R++LYV+D A A   ++      E  N+G  ++    E        L EL+ + V Y   
Sbjct: 231 RDWLYVEDHARALYKVVTEGVIGETYNIGGHNEKQNLEVVKTICSILDELMPKDVPYSEQ 290

Query: 262 IAWDSSKPDGTPRKLVDVQRLTQ-LGWTAQTSLELGLRQTLDWFLAHRLQEARL 314
           I + + +P    R  +D  +++Q L W  + + E GLR+T+ W+L +++   R+
Sbjct: 291 ITYVTDRPGHDRRYAIDSSKMSQELNWLPEETFETGLRKTVQWYLDNQVWSQRV 344