Pairwise Alignments

Query, 501 a.a., ATPase from Synechococcus elongatus PCC 7942

Subject, 696 a.a., AAA-metalloprotease FtsH, with ATPase domain (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  108 bits (271), Expect = 5e-28
 Identities = 72/212 (33%), Positives = 105/212 (49%), Gaps = 8/212 (3%)

Query: 260 PRGLLLAGIQGTGKSLTAKAIAHYWHLPLLRLDVGRLFAGLVGESEARTRQMIQIAEALS 319
           P+G LL G  GTGK+L AKA+A   ++P   L         VG   +R R + + A+  +
Sbjct: 210 PKGALLVGPPGTGKTLLAKAVAGEANVPFFSLAGSDFVEMFVGVGASRVRDLFKQAKEKA 269

Query: 320 PCVLWIDEID---KAFAGLDGRGDSGTANRVFGTVLTWM--AEKQSAVFVVATANNVTSL 374
           PC+++IDEID   +A       G +         +LT M      S V ++A  N V  L
Sbjct: 270 PCIVFIDEIDAVGRARGKNPAMGGNDERENTLNQLLTEMDGFGSNSGVIILAATNRVDVL 329

Query: 375 PPELLRKGRFDEIFFVGLPNQEERRAIFEVHLNRLRPSSLRNYDLERLAAATPGFSGAEI 434
              LLR GRFD    V LP+  ER+ +F VHL  ++       D++ LA  TPGFSGA+I
Sbjct: 330 DKALLRAGRFDRQIHVDLPDLNERKEVFGVHLRPIKIDD--TVDVDLLARQTPGFSGADI 387

Query: 435 EQALIEAMHLGFSQSRDF-NTDDVIDAIGQLV 465
                EA  +     + F    D +DA+ +++
Sbjct: 388 ANVCNEAALIAARHGKKFVGKQDFLDAVDRII 419