Pairwise Alignments

Query, 431 a.a., branched-chain alpha-keto acid dehydrogenase subunit E2 from Synechococcus elongatus PCC 7942

Subject, 650 a.a., pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase (RefSeq) from Shewanella loihica PV-4

 Score =  139 bits (351), Expect = 2e-37
 Identities = 130/438 (29%), Positives = 203/438 (46%), Gaps = 28/438 (6%)

Query: 2   IHEVFMPALSSTMTEGKIVEWVKAPGDRVEKGETVLIVESDKADMDVESFYEGYLATIIV 61
           + E+ +P +    ++  ++E + A GD +E  + ++ +E+DKA M+V + + G L ++ V
Sbjct: 220 VKEISVPDIGDA-SDVDVIEVLVAAGDVIEADQGLITLETDKATMEVPAPFAGKLVSVTV 278

Query: 62  PAGGNAPVGEAIALIAETEAEIEVAKQQAAGAGSAAATPATPAATAAPEPVAVSPEPVAA 121
             G     G  IA I ET++   V     A    AAA PA  A  +AP P A  P     
Sbjct: 279 KVGDKVSQGSVIATI-ETQSSAPV-----AAPAPAAAAPAPVAQASAPAPAASKPPVPHH 332

Query: 122 PTATR---SDRLVASPRAKKLAKSLGVDLASLTGSGPHGRIVAADVEAAAGVTAKPAIAT 178
           P+A     +  + ASP  ++LA+  G DL  +TG+GP GRI+  DV+A      K  ++ 
Sbjct: 333 PSAGSKPVTGAVHASPAVRRLAREFGADLTQVTGTGPKGRILKEDVQA----FIKYELSR 388

Query: 179 PVAPAVVTAPVAAPVATAPAAPAPTPA-IAPGQFVPYSTFQQA----VVRNMEASLNVPV 233
           P A A  +           AAP    A     + VP S  Q+     + RN     +V  
Sbjct: 389 PKASAATSVGAGEGGLQVIAAPKVDFAKFGEVEEVPLSRIQKISGPNLHRNWVTIPHVTQ 448

Query: 234 FRVGYTITTDAIDSLAKQLKPK---GVTIT--VLLAKAVAATLAKHPLLNARATETGVQY 288
           F        +A      ++  K   GV IT  V + KAVA TL + P+ NA  +  G   
Sbjct: 449 FDEADITEMEAFRKQQNEIAAKQKTGVKITPLVFMMKAVAKTLQQFPVFNASLSADGESL 508

Query: 289 NEAINVAIAVAMD-DGGLLTPVLGRADQTDLYSLARNWKDLVARSRTKQLKPEEYTTGTF 347
            +     I VA+D   GL+ PV+   D+  +  L+    ++  ++R  +LK  +     F
Sbjct: 509 IKKKYYHIGVAVDTPNGLVVPVVRDVDKKGIIELSAELMEISVKARDGKLKAADMQGSCF 568

Query: 348 TLSNLGMFGVDRFDAILPPGTGAILAIGASKPTLVATADGL-FGVKRQMQVNLTCDHRHI 406
           T+S+LG  G   F  I+     AIL  G SK  +    +G  F  K  + ++L+ DHR I
Sbjct: 569 TISSLGGIGGTAFTPIVNYPDVAIL--GVSKSEIKPKWNGKEFEPKLMLPLSLSYDHRVI 626

Query: 407 YGAHAAAFLKDLADLIEN 424
            GA AA F   L+ ++ +
Sbjct: 627 DGAMAARFSVTLSSMLSD 644



 Score = 64.3 bits (155), Expect = 1e-14
 Identities = 59/212 (27%), Positives = 89/212 (41%), Gaps = 8/212 (3%)

Query: 2   IHEVFMPALSSTMTEGKIVEWVKAPGDRVEKGETVLIVESDKADMDVESFYEGYLATIIV 61
           + EV +P +     E +++E   A GD +   E+++ VESDKA MD+ + + G LA I V
Sbjct: 4   LKEVLVPDIGGD--EVQVIEICAAVGDTLAAEESIITVESDKATMDIPAPFAGKLAEIKV 61

Query: 62  PAGGNAPVGEAIALIAETEAEIEVAKQQAAGAGSAAATPATPAATAAPEPVAVSPEPVAA 121
             G     G  IA++   EA+        +   +A A PA PAA  A  P +     V  
Sbjct: 62  AVGDTVSEGTLIAMMEAGEAQAAEPAPAESAPVAAPAAPA-PAAPVASAPASAQVIEVTV 120

Query: 122 PTATRSDRLVASPRAKKLAKSLGVDLASLTGSGPHGRIVAADVEAAAGVTAKPAIATPVA 181
           P    +  +        +  S+ VD   +T       +      A      K A+   V+
Sbjct: 121 PDIGDASDVDVIEVLVAVGDSINVDTGLITLETDKATMEVPAPAAGVVKEMKVAVGDKVS 180

Query: 182 PA--VVTAPVAAPVATAP---AAPAPTPAIAP 208
               V+   V+   A AP   AAPAP+   AP
Sbjct: 181 QGSLVLMLEVSGGEAAAPAASAAPAPSAEAAP 212



 Score = 57.8 bits (138), Expect = 1e-12
 Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 14/206 (6%)

Query: 4   EVFMPALSSTMTEGKIVEWVKAPGDRVEKGETVLIVESDKADMDVESFYEGYLATIIVPA 63
           EV +P +    ++  ++E + A GD +     ++ +E+DKA M+V +   G +  + V  
Sbjct: 117 EVTVPDIGDA-SDVDVIEVLVAVGDSINVDTGLITLETDKATMEVPAPAAGVVKEMKVAV 175

Query: 64  GGNAPVGEAIALIAETEAEIEVAKQQAAGAGSAAATPATPAATAAPEPVAVS-PEPVAAP 122
           G     G  + ++  +  E   A   AA A  A +  A PAA A+ E   +S P+   A 
Sbjct: 176 GDKVSQGSLVLMLEVSGGE---AAAPAASAAPAPSAEAAPAAAASIEVKEISVPDIGDAS 232

Query: 123 TATRSDRLVASP---RAKKLAKSLGVDLASLTGSGPH-GRIVAADVEAAAGVTAKPAIAT 178
                + LVA+     A +   +L  D A++    P  G++V+  V+    V+    IAT
Sbjct: 233 DVDVIEVLVAAGDVIEADQGLITLETDKATMEVPAPFAGKLVSVTVKVGDKVSQGSVIAT 292

Query: 179 PVAPAVVTAPVAAPVATAPAAPAPTP 204
               +  +APVAAP   APAA AP P
Sbjct: 293 IETQS--SAPVAAP---APAAAAPAP 313