Pairwise Alignments

Query, 542 a.a., putative alpha-isopropylmalate/homocitrate synthase family transferase from Synechococcus elongatus PCC 7942

Subject, 523 a.a., 2-isopropylmalate synthase (RefSeq) from Shewanella loihica PV-4

 Score =  193 bits (490), Expect = 2e-53
 Identities = 154/522 (29%), Positives = 258/522 (49%), Gaps = 35/522 (6%)

Query: 6   SAAIAVYDTTLRDGAQREGLSLSLEDKLRIAHCLDRLGVKFIEGGWPGANPKDVQFFWEL 65
           S  + ++DTTLRDG Q    SL++++KL+IA  L+RLGV  +E G+P ++P D +    +
Sbjct: 2   SNRVIIFDTTLRDGEQALAASLTVKEKLQIALSLERLGVDVMEVGFPVSSPGDFESVQTI 61

Query: 66  QQRPLQQAEVVAFCSTRRPGQIAGEDELLKALLAAGTTWVTIFGKSWDLHVVEGLKTSLD 125
             R ++ + V A             D   ++L  A    +  F  +  +HV   LK S D
Sbjct: 62  -ARTIKNSRVCALARALE----KDIDAAAQSLSVAEQFRIHTFISTSTIHVESKLKRSFD 116

Query: 126 ENLVMISDSIAYLRTCDRRVIYDAEHWFDGYLANPDYALQTLAAAIEAGAEWIVLCDTNG 185
           + L M   ++ Y R     V +  E   D      D   + + AAI+AGA+ I + DT G
Sbjct: 117 QVLDMAVGAVKYARRFTDDVEFSCE---DAGRTPIDNLCRMVEAAIKAGAKTINIPDTVG 173

Query: 186 GCLPHQISEIVAAVLDRFPSLAPDQTGPQLGIHTHNDSETAVANAIAAVQAGARMVHGTI 245
             +P +   I+  + DR P++  DQ    + +H H+D   +VAN+I AVQ GAR +  T+
Sbjct: 174 YTVPSEFGGIIQNLFDRVPNI--DQA--VISVHCHDDLGLSVANSITAVQHGARQIECTV 229

Query: 246 NGYGERCGNANL---CSVIPNLQLKLGYDCVETE-QLMQLTATSRLVSEIVNLAPDDHAA 301
           NG GER GN +L     +I   +  LG   +ET     ++  TS LVS++ N+    + A
Sbjct: 230 NGIGERAGNCSLEEIAMIIATRKASLG---LETGINAKEIHRTSNLVSQLCNMPVQANKA 286

Query: 302 YVGQSAFAHKGGIHVSAVERNPLTYEHIRPEQVG-NLRRIVISEQSGLSNVLAKARSFGL 360
            VG +AF H  GIH   V ++  TYE + PE +G N   + ++ +SG   +  +    G 
Sbjct: 287 IVGANAFTHSSGIHQDGVLKSQNTYEIMTPESIGLNRNNLNMTSRSGRHVIKHRMEEMGY 346

Query: 361 DLQRND-PACRDLLARLKELESQGYQFEAAEASFDLLMREATGDRPHFFDLKDFHVHCSK 419
             Q  D     +   +L + + Q + ++       L+  EA  +  + + L+   VH   
Sbjct: 347 GEQDYDMDTLYEAFLKLADKKGQVFDYDLEA----LVYVEAQAEDENHYGLQQLVVHSDS 402

Query: 420 QRQELNALATVKVAVTGRDILESAEGNGPVSALDAALRKAIGSFYPAVMQFHLSDYKVRI 479
            + +  A ATV +++ G+ + E+A GNGPV A   A+ +A G       + ++S Y++  
Sbjct: 403 TQGQ--ATATVTLSIDGKAVTEAATGNGPVDAAYKAIARASG------CEINISSYQLSA 454

Query: 480 LDGAAGTSAKTRVLVESSNGSQRWSTVGVSGNIIEASYQAVV 521
                G  A  +V + +    Q +  VG++ +++EAS  A++
Sbjct: 455 --KGQGQDALGQVDITAKYHDQSFHGVGLATDVVEASAAALI 494