Pairwise Alignments

Query, 314 a.a., 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase from Synechococcus elongatus PCC 7942

Subject, 284 a.a., 4-diphosphocytidyl-2C-methyl-D-erythritol kinase (RefSeq) from Shewanella loihica PV-4

 Score =  108 bits (270), Expect = 1e-28
 Identities = 83/273 (30%), Positives = 125/273 (45%), Gaps = 29/273 (10%)

Query: 8   APAKINFYLEILGDRPDGFHELAMVMQSIALGDRLHLRQRQGQGFQLGCDRADLEVDERN 67
           APAK+N +L + G R DG+HEL  + Q I   D L           L  +   +  +  N
Sbjct: 11  APAKLNLFLHVNGRRADGYHELQTLFQFIDYCDYLDFAVNDSGSLTLHSEMEAVVANSDN 70

Query: 68  LILKAAQRLQRSFPQIGGVDFFLEKRIPIGAGLAGGSTDGAAALVGLDIFSGLGLTQPEL 127
           LILKAA+ LQ       G + +L+K++P+G G+ GGS+D A  LV L+      L+Q EL
Sbjct: 71  LILKAAKSLQEYTGTHQGAEIWLDKKLPMGGGIGGGSSDAATTLVALNHLWQTQLSQDEL 130

Query: 128 EAIAAELGSDMPFCVAGGTQLCTSRGEQLTPLPPLPSLSLVLAKFESLSVSTPWAYGRYR 187
             I   LG+D+P  + G        GE+L P+    +  L+L         TP  +    
Sbjct: 131 AKIGLSLGADVPVFINGLAAFAEGVGEKLIPVEAPENWYLIL---------TPDVHVSTA 181

Query: 188 EQFGDRYLQTEPARRDRLQALHAGPLLQAMSAGDPVAIAQHLRNDLEAVVLPEYPQVAEL 247
           E F D  L  +  +               +S  D ++   H  ND +  V   YPQVA+ 
Sbjct: 182 EVFNDPLLPRDTPK---------------LSMDDLMSSDWH--NDCQPRVAERYPQVAKA 224

Query: 248 RSVLGNCSGILAAQMSGSGPSVFGIAENPTAAQ 280
            + L   +    ++M+G+G  VFGI +    A+
Sbjct: 225 LAWLIEYA---PSRMTGTGACVFGIFDTRQQAE 254