Pairwise Alignments

Query, 292 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

Subject, 300 a.a., 16S rRNA (cytidine(1402)-2'-O)-methyltransferase from Ralstonia sp. UNC404CL21Col

 Score =  184 bits (467), Expect = 2e-51
 Identities = 116/275 (42%), Positives = 152/275 (55%), Gaps = 8/275 (2%)

Query: 9   LYLVGTPLGNLEDISYRAVKILRGVDAIAAEDTRRTGRLLQALGIDRPQVSYHEHNRQQR 68
           LY+V TP+GN  D+S RA  +L  VDA+A EDTR TG+LL  LG+ RP ++ HEHN ++ 
Sbjct: 20  LYVVATPIGNAADVSLRARYVLGIVDAVACEDTRNTGQLLNRLGLSRPMLAAHEHNEREA 79

Query: 69  GPELIARLQAGQSIALVSDAGMPAIADPGQELVQAAIAAGLTVVPIAGPSAVIAALCASG 128
              ++ARL  G+ IA VSDAG P ++DPG  +V+A  AAG  V+P+ G SAV+ AL A+G
Sbjct: 80  AARIVARLAQGERIAYVSDAGTPGVSDPGSRIVEAVRAAGQRVIPLPGASAVVTALSAAG 139

Query: 129 ----LSSDRFAFEGFLPAKRKARRDVLQSLHQEARTLIFYESPHRLRDTLEDLAAVFGGD 184
                S  +F F GFLP K   R   ++         + YE+PHR+  TL  LA      
Sbjct: 140 ELLDTSGGQFTFVGFLPPKAGQRDAAIRQWVAHGPAWVLYEAPHRIEATLAALAEHLPA- 198

Query: 185 RAIVLARELTKLHEEFWRGSVTEAIAEFT--RREPQGEFTLVVAGAVVQTQALSEDTLRQ 242
           R I++ RELTKL EE       +A A         +GEF LVV GA  Q  A +     Q
Sbjct: 199 RRILIGRELTKLFEEIVVLPAADAPAWLAADASHGKGEFVLVVEGAGAQDAAPNAMAADQ 258

Query: 243 ELATLLAAGVSRSEASRTLAAQTGTPKRRLYQLAL 277
            L  LLA  +    A++   A TG     LYQ AL
Sbjct: 259 VLRLLLAE-LPAKRAAKLAGAITGASVDALYQSAL 292