Pairwise Alignments

Query, 422 a.a., NADH dehydrogenase transmembrane protein from Sinorhizobium meliloti 1021

Subject, 444 a.a., type 2 NADH dehydrogenase from Synechococcus elongatus PCC 7942

 Score =  365 bits (938), Expect = e-105
 Identities = 198/414 (47%), Positives = 261/414 (63%), Gaps = 10/414 (2%)

Query: 7   VVVVGGGFGGLQLVNDLKGAPVKVTLIDRRNHHLFQPLLYQVATTVLATSEIAWPIRRLY 66
           VVV+GGGFGGL    +L    V++TLID+RN HLFQPLLYQVAT  ++  +IA P+R + 
Sbjct: 10  VVVIGGGFGGLYTALNLGKTSVELTLIDKRNFHLFQPLLYQVATGEISPGDIAAPLRAIV 69

Query: 67  RDRQEVTTLLGEVAGVDMIAKEVTLAHGQSIPYDTLVLATGATHAYFGHDEWAAVAPGLK 126
                   +LGEV  +D  A  V +   + + YD LV+ATGA+H YFG+D+W   APGLK
Sbjct: 70  GRNPNTRVILGEVTDIDPQAHWVRVGD-EIVEYDYLVVATGASHHYFGNDQWQPFAPGLK 128

Query: 127 TLEDATTIRRRVLIAFEQAEVEEDTARRDALLTFTIIGAGPTGVELAGIIAEMAHRTLPG 186
           T+EDA  +RRR+  A EQAE E D  R+ A LTFTI+GAGPTGVELAG IAE+    +  
Sbjct: 129 TVEDALEMRRRIYFALEQAEQESDPERQQAWLTFTIVGAGPTGVELAGAIAELTRGEMRK 188

Query: 187 EFRRIDTRLARVVLVEAGPRILPAFSEELSAYASRELEKLGVEVLTGTPVTDCTDEGVTI 246
           EFR +DT  A+V+L+E   R+LP F  ELSA A  +LE LGV V T   VTD  ++ V  
Sbjct: 189 EFRNVDTTKAKVILIEGMDRVLPPFPPELSAQAQVQLEGLGVTVQTKAMVTDIQEDRVVF 248

Query: 247 --GESF--VPSRTLVWAAGVQASP----AARWVGADADRAGRVKVGPDLTAPHHPDIFVI 298
             G+    +PSRT +WAAGV+ASP     A+  GA+ DR GRV V PDL  P  P+++V+
Sbjct: 249 KTGDDLHEIPSRTTLWAAGVKASPLGKLLAQRTGAELDRIGRVIVQPDLQLPTDPNVYVL 308

Query: 299 GDTASVIQEDGKPVPGIAPAAKQQGAYVAQVIRGRLTGSPAPGPFRYRHQGSLATIGKRA 358
           GD A    + G P+PG+A  A QQGAY+ + ++ RL   P   PFRY+  GS+A IG+ A
Sbjct: 309 GDLAHCPDQAGNPLPGVAAVAMQQGAYLGKALKRRLKSQPV-DPFRYQDFGSMAVIGRNA 367

Query: 359 AIIDFGRIKLRGSLAWWIWGIAHIYFLIGTRSRFAVAWSWLWTYLSGQHSARLI 412
           A+     I+L G  AW +W   H+++LI   S+  V   W WTY + +   RLI
Sbjct: 368 AVARLAGIRLSGFPAWLVWAFIHVWYLIEFDSKLLVMVQWAWTYFNQKRGTRLI 421