Pairwise Alignments

Query, 422 a.a., NADH dehydrogenase transmembrane protein from Sinorhizobium meliloti 1021

Subject, 430 a.a., FAD-dependent pyridine nucleotide-disulfide oxidoreductase from Herbaspirillum seropedicae SmR1

 Score =  407 bits (1045), Expect = e-118
 Identities = 209/412 (50%), Positives = 276/412 (66%), Gaps = 6/412 (1%)

Query: 6   HVVVVGGGFGGLQLVNDLKGAPVKVTLIDRRNHHLFQPLLYQVATTVLATSEIAWPIRRL 65
           HVV++G GFGGL    +L  A V++T+IDR NHHLFQPLLYQVAT  L+   I+ PIR +
Sbjct: 3   HVVIIGCGFGGLAAARELANAEVRITMIDRSNHHLFQPLLYQVATAGLSAPAISAPIRAI 62

Query: 66  YRDRQEVTTLLGEVAGVDMIAKEVTLAHGQSIPYDTLVLATGATHAYFGHDEWAAVAPGL 125
              ++ +TTL+  V G+D  AK V L  G ++ YD L++A G+TH+YFG DEW+++APGL
Sbjct: 63  LAHQRNLTTLMAAVTGIDTAAKTVQLEDGSTMAYDHLIVAAGSTHSYFGRDEWSSLAPGL 122

Query: 126 KTLEDATTIRRRVLIAFEQAEVEEDTARRDALLTFTIIGAGPTGVELAGIIAEMAHRTLP 185
           KTLEDA  IR+R+L+AFE+AE E D  RR   LTFT+IG G TGVE+AG + E+A  TL 
Sbjct: 123 KTLEDAFEIRKRILMAFERAERESDARRRQEWLTFTVIGGGATGVEMAGTLVEIARHTLA 182

Query: 186 GEFRRIDTRLARVVLVEAGPRILPAFSEELSAYASRELEKLGVEVLTGTPVTDCTDEGVT 245
           GEFR ID   ARVVL+E   RIL A+  +LS  A  +L+KLGV+V TG+ V    +  V 
Sbjct: 183 GEFRNIDPHSARVVLIEGSDRILGAYPPDLSDKAREQLQKLGVDVRTGSRVVHIDETCVR 242

Query: 246 I----GESFVPSRTLVWAAGVQASPAARWVGADADRAGRVKVGPDLTAPHHPDIFVIGDT 301
                GE  + +RT++W+AGV ASP  R +G + DRAGRV V P+L    H D++VIGD 
Sbjct: 243 YTNFDGEQTLSTRTVIWSAGVAASPLGRALGVELDRAGRVPVSPELNIAGHDDVYVIGDL 302

Query: 302 ASVIQEDGKPVPGIAPAAKQQGAYVAQVIRGRLTGSPAPGPFRYRHQGSLATIGKRAAII 361
           A+  Q +GKPVPG++PAAKQ G   A+ I+ R+ G   P  F Y+  GSLATIG++AAI 
Sbjct: 303 AAA-QSEGKPVPGVSPAAKQMGRVAARNIKHRIAGQ-TPETFVYQDYGSLATIGRKAAIA 360

Query: 362 DFGRIKLRGSLAWWIWGIAHIYFLIGTRSRFAVAWSWLWTYLSGQHSARLIT 413
             G++K  G  AW  W   H+YFLIG R+R  V   W W Y + + SAR+I+
Sbjct: 361 MVGKLKFSGYPAWLFWLFVHVYFLIGFRNRIMVMADWAWAYFTFKRSARVIS 412