Pairwise Alignments

Query, 388 a.a., regulatory protein from Sinorhizobium meliloti 1021

Subject, 411 a.a., urea ABC transporter substrate-binding protein from Burkholderia phytofirmans PsJN

 Score = 95.5 bits (236), Expect = 2e-24
 Identities = 78/352 (22%), Positives = 152/352 (43%), Gaps = 13/352 (3%)

Query: 9   VGVLFSRSGSYAQPAGQGFGGAMAAIEHVNASRRF---PFRLEAHHFDPAGEADRYAPFC 65
           +G+L   SG++A            A++ +NA       P +L A  +D   +  ++    
Sbjct: 32  IGLLEDASGNFALATIPKIHATELAVDEINAKGGILGRPVQLIA--YDTQSDNTKFQELA 89

Query: 66  RQLIREHGVRHVVGCTTSWSRKEVIPVVEKLDALLWYPCVYEGFEVSENLIYVAACANQH 125
           R+L++      + G  +S SR+ + P++++   L WY   YEG     N     A   Q 
Sbjct: 90  RRLVQTDKPDVIFGAFSSASREAIRPIMDRAHQLYWYDNQYEGGVCDTNTFVTGAVPEQQ 149

Query: 126 LVPLLDYIAPRFGSRAMLVGSNYIWGWETNRIARDILHRSGGEILGERFVSMGDTDIAHL 185
              L+ ++  ++G +   + ++Y +G  +    R+I+  +GG ++GE F+ +  +     
Sbjct: 150 FSTLIPWMMQKYGKKVYTIAADYNFGQISAEWVRNIVKENGGTMVGEEFIPLSVSQFGQT 209

Query: 186 IDEVREKKPDFILNNLIGPSSYAFLRALQALAEADDRFHPDRCPVISCNLYEGEIAGLGH 245
           I  +++ KPDF++  L+G +  ++    QA A  +    P    V     YE +      
Sbjct: 210 IQNIQKAKPDFVVTLLVGANQSSYYEQ-QASAHLN---LPMASSVNVGQAYEHK-RFKPP 264

Query: 246 AAAGHFTVSCYFRTIQSPENDSFLKTLAALDPG-AVVDAFYVQAFSAVVMIAEAIARSGS 304
           A    +  + Y   + +P ++ F K   A  P    ++     A+ A+ +   A+ ++ S
Sbjct: 265 ALKDMYVTANYVEEVDTPASNDFKKRFHAKFPNEPYINQEAANAYDAIYLYKAAVEKAKS 324

Query: 305 DDADLVRAALCGQAVDT--PLGAISVDRWTNHVELPAHIGRAGADGSFEIVK 354
            + D VR AL    + T    G + +D  ++H      +     D S EI K
Sbjct: 325 TNQDQVRKALESGDICTTGEQGKVCIDPKSHHASHTIFLVHVKEDHSVEIPK 376