Pairwise Alignments

Query, 388 a.a., regulatory protein from Sinorhizobium meliloti 1021

Subject, 431 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Burkholderia phytofirmans PsJN

 Score =  140 bits (354), Expect = 5e-38
 Identities = 113/377 (29%), Positives = 176/377 (46%), Gaps = 27/377 (7%)

Query: 9   VGVLFSRSGSYAQPAGQGFGGAMAAIEHVNASRRFPFR-LEAHHFDPAGEADRYAPFCRQ 67
           VG+L S SG+ A         A+  I  +N +     R LE    DPA     +A   RQ
Sbjct: 35  VGILHSLSGTMAISETSLKDTALMTIADINKNGGVMGRQLEPVVVDPASNWPLFAEKARQ 94

Query: 68  LIREHGVRHVVGCTTSWSRKEVIPVVEKLDALLWYPCVYEGFEVSENLIYVAACANQHLV 127
           LI +     V GC TS SRK V+PV E+L+ LL+YP  YEG E+S N+ Y  A  NQ  +
Sbjct: 95  LITQDKCAVVFGCWTSVSRKSVLPVFEELNGLLFYPVQYEGEEMSRNVFYTGAAPNQQAI 154

Query: 128 PLLDYIAPRFG---SRAMLVGSNYIWGWETNRIARDILHRSGGE--ILGERFVSMGDTDI 182
           P  +Y+    G    R  L+G++Y++   TN+I R  L   G +   + E +   G +D 
Sbjct: 155 PATEYLMSAEGGGAKRFFLLGTDYVYPRTTNKILRAFLKSKGVQEADIQEVYTPFGHSDY 214

Query: 183 AHLIDEVR---EKKPDFILNNLIGPSSYAFLRAL--QALAEADDRFHPDRCPVISCNLYE 237
             ++  ++   +     +++ + G S+  F + L  Q L  +D        PV++ ++ E
Sbjct: 215 QTIVANIKTFSQGGKTAVISTVNGDSNVPFYKELGNQGLKASD-------VPVVAFSVGE 267

Query: 238 GEIAGLG-HAAAGHFTVSCYFRTIQSPENDSFLKTLAALD-----PGA---VVDAFYVQA 288
            E+ G+      G+     YF ++++P N+ F K  AA       PG    V +      
Sbjct: 268 EELRGIDTKPLVGNLAAWNYFMSLRNPANEKFKKQWAAWVAQNNLPGGTKRVTNDPMEAT 327

Query: 289 FSAVVMIAEAIARSGSDDADLVRAALCGQAVDTPLGAISVDRWTNHVELPAHIGRAGADG 348
           F  + M  +A+ ++ S + D VR A+ GQ    P G        +H+  P  IG   ADG
Sbjct: 328 FVGIHMWKQAVEKAKSTEVDKVRVAMVGQTFAAPSGFTLEMDGNHHLHKPVMIGEVRADG 387

Query: 349 SFEIVKRSYEAIAPDPF 365
            F +V R+  AI   P+
Sbjct: 388 QFNVVWRTKTAIRAQPW 404