Pairwise Alignments

Query, 302 a.a., ABC transporter for D-Cellobiose and D-Salicin, permease component 2 (from data) from Sinorhizobium meliloti 1021

Subject, 301 a.a., ABC transporter permease from Azospirillum brasilense Sp245

 Score =  114 bits (284), Expect = 4e-30
 Identities = 72/275 (26%), Positives = 138/275 (50%), Gaps = 23/275 (8%)

Query: 28  ILTAMVIFVGGTAW----TVVYSFTNSKLLPRLAF--VGFDQYERLWAAPRWLVSIQNLA 81
           +L  +++  G   W    TV +SFT++ L     F  VG D Y  L   P W  ++ N  
Sbjct: 22  LLPMLIVLAGVAGWPLFRTVFFSFTDATLATLEGFQGVGLDNYLWLMRDPVWWRAVWNTL 81

Query: 82  VFGCLSLVFSLVIGFVLAALMDQKIRFENTFRTIMLYPFALSFIVTGLVWQWLLNPQYGI 141
           VF  +S+     +G  +A +++  +      R  +L P+A+  +V+  +W W+ +  YG+
Sbjct: 82  VFTVVSVGIETALGLGIALILNAHLPGRGLLRAAVLIPWAIPTVVSAQMWGWMFHDLYGV 141

Query: 142 -QSIVRSLG-------WTSFSFDPLYNSNIVIYGILIAALWQGTGLVMCLMLAGLRGIDE 193
             +I+  LG       WT+   DP    ++ +  ++   +W+ T  +  L+LA L+ +  
Sbjct: 142 VNAILMGLGLIAEPRAWTA---DP----DLALPVVIAVDVWKSTPFMALLILAALQMLPR 194

Query: 194 DIWKAARVDGIPMWKTYVLIIIPMMRGVFITTLVIIASGIVKVYDLVVAQTSGGPGIASE 253
           D+++AARVDG+   K +V I +P++R   +  ++      ++V+DL+   T       S 
Sbjct: 195 DLYEAARVDGVHPVKVFVRITLPLIRPALMVAVLFRTLDALRVFDLMYVLTGNSRSTMS- 253

Query: 254 VPAKYVYDYMFQAQNLGQGFAASTMMLVTVAIIIV 288
             + Y   Y+   Q++G G AA+T++++ +A+  V
Sbjct: 254 -MSVYARQYLIDFQDVGYGSAAATLLVLVLAVATV 287