Pairwise Alignments

Query, 302 a.a., ABC transporter for D-Cellobiose and D-Salicin, permease component 2 (from data) from Sinorhizobium meliloti 1021

Subject, 294 a.a., N-Acetyl-D-glucosamine ABC transport system, permease protein 1 from Xanthomonas campestris pv. campestris strain 8004

 Score =  105 bits (262), Expect = 1e-27
 Identities = 78/282 (27%), Positives = 136/282 (48%), Gaps = 11/282 (3%)

Query: 22  IASIPMILTAMVIFVGGTAWTVVYSFTNSKLLP-----RLAFVGFDQYERLWAAPRWLVS 76
           + + P IL   + F       +V S T+  L        L FVG   Y  L   P +  S
Sbjct: 11  VFAAPSILVLGMFFGVPVFAALVLSVTDFDLYALADSSHLRFVGLGNYIELLQTPLFWKS 70

Query: 77  IQNLAVFGCLSLVFSLVIGFVLAALMDQKI-RFENTFRTIMLYPFALSFIVTGLVWQWLL 135
           + N   F  L +  S+ +    A L++ K  RF+  FRT +  P   + +   ++W++L 
Sbjct: 71  LWNTTYFVLLGVPMSIAVSLGAALLLNAKASRFKALFRTALFAPVVTTLVAVAVIWRYLF 130

Query: 136 NPQYGIQSIVRS-LGWTSFSFDPLYNSNIVIYGILIAALWQGTGLVMCLMLAGLRGIDED 194
           + +YG+ +   S LG      D L +    +  I++ A+W+  G  M + LAGL+ I +D
Sbjct: 131 HIKYGLVNFGLSHLGIAPI--DWLGDPRWAMPTIMLFAVWKNFGYNMVIFLAGLQAIPQD 188

Query: 195 IWKAARVDGIPMWKTYVLIIIPMMRGVFITTLVIIASGIVKVYDLVVAQTSGGPGIASEV 254
           +++AAR+DG   WK ++ I +PM+  V +   VI  SG  +++      T G P  ++  
Sbjct: 189 LYEAARIDGASRWKQFLHITLPMLGPVLMVVGVITISGYFQLFAEPYVMTRGDPLQSTVS 248

Query: 255 PAKYVYDYMFQAQNLGQGFAASTMMLVTVAIIIVPWAYLEFG 296
              ++++  F+  NLG+  A++   L+ + I+ V    L FG
Sbjct: 249 VLYFMFEEGFKWWNLGR--ASAVAFLLFLIILTVTTVMLRFG 288