Pairwise Alignments

Query, 178 a.a., RNA polymerase sigma-E factor (sigma-24) protein from Sinorhizobium meliloti 1021

Subject, 176 a.a., RNA polymerase subunit sigma-24 from Burkholderia phytofirmans PsJN

 Score = 77.4 bits (189), Expect = 1e-19
 Identities = 53/144 (36%), Positives = 77/144 (53%), Gaps = 1/144 (0%)

Query: 19  RLFAYAVALSRDRDGAQDIFQECIARALDARSVPETEPAFRAWLFAILRNIWIDQSRLRR 78
           +L  YA AL+ D   A D+ Q+   RAL   +    +   RAWL  ILR+++IDQ R RR
Sbjct: 13  QLRRYARALTGDHAWADDLVQDTAERALARWAAFRPDSNLRAWLLTILRHLYIDQLRGRR 72

Query: 79  RRSDLEQEFVTDLVPAPVAPETVLVDAFSVRQAFTRLSTEHREILALVDISGFSYEEVAM 138
             +  ++      + AP      LV    +++A   L  E RE+L LV +   SY+E + 
Sbjct: 73  EIAVDDESAPWRNLEAPQGEVDGLV-LRDLQRALYCLPVEQREVLLLVCVEELSYQEASR 131

Query: 139 MIAVPKGTVMSRVSRARRALASYL 162
            + VP GTVMSR+SRAR  + + L
Sbjct: 132 ALGVPIGTVMSRLSRAREHMRALL 155