Pairwise Alignments

Query, 337 a.a., periplasmic binding ABC transporter protein from Sinorhizobium meliloti 1021

Subject, 318 a.a., Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) from Pseudomonas fluorescens FW300-N2E2

 Score = 68.6 bits (166), Expect = 2e-16
 Identities = 79/327 (24%), Positives = 135/327 (41%), Gaps = 33/327 (10%)

Query: 9   AALSVACLAAGLTAPQANAADR-EFALVFKVLNNAFSPPIQQGCEAAAKK-LGDVTCTYL 66
           A L+ A  A  L++  A  A++ + ALV K L N F   ++ G +A  K+   D      
Sbjct: 13  AMLAAASAALPLSSAFAQTAEKPKVALVMKSLANEFFLTMEDGAKAYQKEHSADFDLISN 72

Query: 67  G-PTEYDEAKQVQLAQDMVTRGVAGLGVSAGNPKAMARIMKMAQDKGIPVVTFDTDVLP- 124
           G   E D A Q+++ + M+   V  L ++  + KAM  ++K A D GI V+  D  + P 
Sbjct: 73  GIKDETDTANQIRIVEQMIVSKVDALIIAPADSKAMVPVIKKAVDAGITVINIDNQLDPA 132

Query: 125 --EDAGLRSTYIGTDNYEFGIALAQKVLESKKDGGTVCIQSGAPASENLKARVQGIRDTL 182
             +   +   ++G DN +    + + + +  K G  V I  G   + N +AR  G +D +
Sbjct: 133 VVKSKNINVPFVGPDNRKGARLVGEYLAKQLKAGDEVGIIEGVSTTTNAQARTAGFKDAM 192

Query: 183 AGVTKDKGAEKLTGQNG-WTEPAGCPVYNNDDITLAAQQVRDVMTNNPELSAFVAVGGWA 241
                    + ++ Q+G W            +I    Q    +++  P + A +A     
Sbjct: 193 EAAQ----VKVVSLQSGDW------------EINKGNQVAASMLSEYPNIKALLAGNDSM 236

Query: 242 QYAPQAYKQAMEPLKARLDSKDLVVVFGDNFGPQLPLLAEGLSHYNIGQRPYDMGYETIM 301
                    A+  ++A   +  + VV  DN     P+L +G       Q         I 
Sbjct: 237 AVG------AVSAVRAAGKAGKVQVVGYDNINAIKPMLKDGRVLATADQFAAKQAVFGIE 290

Query: 302 ALDKLTKGEKVEP----FIKTGTEVCT 324
              K+ KGEKV+      I+T  E+ T
Sbjct: 291 TALKILKGEKVDSGTNGVIETPVELVT 317