Pairwise Alignments

Query, 337 a.a., periplasmic binding ABC transporter protein from Sinorhizobium meliloti 1021

Subject, 296 a.a., D-ribose ABC transporter substrate-binding protein from Klebsiella michiganensis M5al

 Score = 72.8 bits (177), Expect = 1e-17
 Identities = 82/313 (26%), Positives = 136/313 (43%), Gaps = 35/313 (11%)

Query: 4   VRTLTAALSVACLAAGLTAPQANAADREFALVFKVLNNAFSPPIQQGCEAAAKKLGDVTC 63
           ++ L   +S   L+A ++A  A A D   ALV   LNN F   +++G +  A KLG    
Sbjct: 3   MKKLATLVSAVALSATVSA-NAMAKDT-IALVISTLNNPFFVSLKEGAQKEADKLGYNLV 60

Query: 64  TYLGPTEYDEAKQVQLAQDMVTRGVAGLGVSAGNPKAMARIMKMAQDKGIPVVTFDTDVL 123
                ++ + AK++   QD+  RG   L ++  +  A+   +K+A    IPV+T D    
Sbjct: 61  VL--DSQNNPAKELANVQDLTVRGTKLLLINPTDSDAVGNAVKLANQAKIPVITLDRQAS 118

Query: 124 PEDAGLRSTYIGTDNYEFGIALAQKVLESKKDGGTVCIQSGAPASENLK-ARVQGIRDTL 182
             D     ++I +DN          VL  K  G  +  + G    EN K   +QGI  T 
Sbjct: 119 KGDV---VSHIASDN----------VLGGKMAGDYIAKKVG----ENAKIIELQGIAGTS 161

Query: 183 AGVTKDKGAEKLTGQNGWTEPAGCPVYNNDDITLAAQQVRDVMTNNPELSAFVAVGGWAQ 242
           A   + +G ++    + +   A  P   + D T     +++++T +P++ A  A      
Sbjct: 162 AARERGEGFQQAVAAHKFNVLASQPA--DFDRTKGLNVMQNLLTAHPDVQAVFA------ 213

Query: 243 YAPQAYKQAMEPLKA--RLDSKDLVVVFGDNFGPQLPLLAEGLSHYNIGQRPYDMGYETI 300
              Q  + A+  L+A       D++VV  D        +  G     I Q P  +G + +
Sbjct: 214 ---QNDEMALGALRALQTAGKSDVMVVGFDGTPDGEKAVNSGKLAATIAQLPEQIGVKGV 270

Query: 301 MALDKLTKGEKVE 313
              DK+ KGEKVE
Sbjct: 271 ETADKVLKGEKVE 283