Pairwise Alignments

Query, 337 a.a., periplasmic binding ABC transporter protein from Sinorhizobium meliloti 1021

Subject, 325 a.a., ABC transporter substrate-binding protein from Herbaspirillum seropedicae SmR1

 Score = 74.3 bits (181), Expect = 4e-18
 Identities = 78/308 (25%), Positives = 128/308 (41%), Gaps = 41/308 (13%)

Query: 16  LAAG----LTAPQANAADR-EFALVFKVLNNAFSPPIQQGCEAAAKKLGDVTCTYLGPTE 70
           LAAG    + A  A+AA++   A+V K L N F     +G + AA++LGDV   Y GPT 
Sbjct: 1   LAAGAIGLIAAAPAHAAEKVRIAMVVKSLGNGFFDAAHEGAKEAARELGDVEVIYTGPTT 60

Query: 71  YDEAKQVQLAQDMVTRGVAGLGVSAGNPKAMARIMKMAQDKGIPVVTFDTDVLPEDAGLR 130
                Q+++   ++++ V  + +SA +  A+  I K A  +G+ V++FD+ +     G R
Sbjct: 61  PTAEGQIEIVNSLISQKVDAIVISANDANALVPITKRAMQRGVKVLSFDSGIA---KGGR 117

Query: 131 STYIGTDNYE-FGIALAQKVLESKKDGGTVCIQSGAPASENLKARVQGIRDTLAGVTKDK 189
              +   N E  G+   Q   E+    G V I S    + N    +  ++  LA    + 
Sbjct: 118 LMQLNPSNAELIGLKQIQMAAEAIGGAGDVAILSATAQATNQNIWIGEMKKALA--RPEF 175

Query: 190 GAEKLTGQNGWTEPAGCPVYNNDDITLAAQQVRDVMTNNPELSAFVAVGGWAQYAPQAYK 249
              KL             VY +D    + ++   ++ ++P L A +A       A     
Sbjct: 176 SRMKLV----------ATVYGDDQSDKSYREAIGLLRSHPGLKAIIAPTTVGINAAG--- 222

Query: 250 QAMEPLKARLDSKDLVVVFGDNFGPQLPLLAEGLSHYNIGQ-------RPYDMGYETIMA 302
                 KA +D K    + G  +   L L +E   H   G         P D+GY    A
Sbjct: 223 ------KAVVDEK----LVGKVYVTGLGLPSEMAGHVKSGAVKSFAIWNPIDLGYAATYA 272

Query: 303 LDKLTKGE 310
             +  KG+
Sbjct: 273 AYQFVKGK 280