Pairwise Alignments

Query, 337 a.a., periplasmic binding ABC transporter protein from Sinorhizobium meliloti 1021

Subject, 314 a.a., D-ribose ABC transporter substrate-binding protein from Bifidobacterium breve UCC2003

 Score = 77.4 bits (189), Expect = 4e-19
 Identities = 79/315 (25%), Positives = 140/315 (44%), Gaps = 33/315 (10%)

Query: 5   RTLTAALSVAC---LAAGLTA--PQANAADREFALVFKVLNNAFSPPIQQGCEAAAKKLG 59
           +T  AAL++ C   L AG  A    +++   + AL+   LNN F   ++ G +AAAK LG
Sbjct: 8   KTFRAALAIVCAGTLMAGTAACGSTSSSGGDKVALLVSTLNNPFFVDLRDGAQAAAKDLG 67

Query: 60  DVTCTYLGPTEYDEAKQVQLAQDMVTRGVAGLGVSAGNPKAMARIMKMAQDKGIPVVTFD 119
                 +   + D + Q   AQ+  ++G   + ++  +  A +  +       +PV++ D
Sbjct: 68  --VDLMVSDAQNDSSTQQNQAQNAQSQGAKAVIINPVDSDAASPAVAPLLSSSLPVISVD 125

Query: 120 TDVLPEDAGLRSTYIGTDNYEFGIALAQKVLESKKDGGTVCIQSGAPASENLKARVQGIR 179
             V  ED    +++I +DN   G   A ++ ++  + G V I  G P + + + R  G +
Sbjct: 126 RSVTGEDV---TSHIASDNVAGGAQAADELAKAVGEKGKVIILQGTPGAASTRDRGDGFK 182

Query: 180 DTLAGVTKDKGAEKLTGQNGWTEPAGCPVYNNDDITLAAQQVRDVMTNNPELSAFVAVGG 239
                + K  G E +  Q             N D   A     ++M +NP++     VG 
Sbjct: 183 KE---IKKYSGIEVVAEQTA-----------NFDRAEALDVTTNLMQSNPDV-----VGI 223

Query: 240 WAQYAPQAYKQAMEPLKARLDSKDLVVVFG-DNFGPQLPLLAEGLSHYNIGQRPYDMGYE 298
           +A+    A   A++ L ++  +   V +FG D     L  ++ G     I Q+P ++G +
Sbjct: 224 YAENDEMAL-GAIQSLGSKAGAD--VKIFGFDGTEDGLKAVSNGTMVGTIAQQPKELGKK 280

Query: 299 TIMALDKLTKGEKVE 313
            + A  K  KGE VE
Sbjct: 281 AVEAAVKAIKGESVE 295