Pairwise Alignments

Query, 537 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 473 a.a., DNA repair nucleotidyltransferase from Pseudomonas fluorescens FW300-N2C3

 Score =  110 bits (275), Expect = 1e-28
 Identities = 127/524 (24%), Positives = 197/524 (37%), Gaps = 68/524 (12%)

Query: 23  RILSIHFPHLPTDRVARSRWGASWLSRGRPDHPPVVFAAKIDNAMRLVALDTFAERIGLK 82
           R + I FP L  D   R R          PD P  +        + L A++  A  +GL+
Sbjct: 2   RWVCILFPQLALDAALRQR--------PDPDQPLALLTGPAQRRV-LQAVNAPARALGLR 52

Query: 83  RGQGAAEARAMCPSLDVIAADPAADQAFLEALADWCDRYTPLVALDGTDGLFLDITGCAH 142
            GQ    A+A+         D A  + + + LA W  R++  V++     L  +I     
Sbjct: 53  PGQTMTAAQALSKGFATAEYDAAQIEHWQQFLAAWAYRFSAQVSVHYPSTLLFEIESSLG 112

Query: 143 LHGGEKALISDVLSRLFSLGVEARATVSSAAGLSWAVTRYGDADVIAPGDG-DPVLAPLP 201
           L G      + + + L  LG   R   +     +  +    DA V+   +     L  +P
Sbjct: 113 LFGPWPVFETRLRAELTELGFRHRIVAAPNPVAARVLANAYDALVVPDAETLQQYLGHMP 172

Query: 202 VAALRLPADTAAALERVGLKQIGDLLEAPRAPLARRFGSSLLLRLDQARGFEDEPLSPRL 261
           V  + L  D A AL R+GL+++  +   PR  LARRF + +L  LD   G     LS  L
Sbjct: 173 VERIGLEPDVATALSRMGLRRLSQVQALPRQTLARRFEAQVLKHLDALTGHRTLALSFYL 232

Query: 262 PVPSFSAERRLAEPLQDEEHILELTRHLARDVRSSLERHGEGGRLFELLLFRVDGRVFRV 321
           P   F     L   +Q  + +L   R L  D+ + L     G + F+L L          
Sbjct: 233 PPDRFDVRIELNYDVQSHQALLFPLRRLTGDLSAFLCGRDSGVQRFDLHL---------- 282

Query: 322 RAHAAVPLNDAVRIAALFRERLQAVHDDLDAGYGFEIVRLSVLRSERL---------DPA 372
             HA +P +  +++  L  ER  A+  +L  G   ++   + +R  RL            
Sbjct: 283 -EHAGLP-DTVIKVGLLSAERAPAMLFELARGRLEQVQVEAPVRGFRLCAEDLPSFVPQR 340

Query: 373 QQDFSGAPDESQPLAAFVDKVSARFGPGCLMQATLAESHLPERAGGFAAVTDVAAVLRTA 432
            + F   P +S P     +++ AR G   +      + H PE A    +           
Sbjct: 341 LELFDERPQQSLPWEQLRERLRARLGDDAVQGLGFRDDHRPECAWQMTS----------- 389

Query: 433 ALEEKAFPENRPLRIFAHPEPVEATAEVPEGAPRSFNWRKTRYRVARAE-----GPERIA 487
                              +P   T  V +G  R     +    +A+ +     GPERI 
Sbjct: 390 -------------------QPRSQTCPVRDGVQRPGWLLEEPQALAQGQAHILMGPERIE 430

Query: 488 AEWWIDGEDHPTRDYFRIEDQEGRRFWLFREGLYGRETASPRWF 531
             WW DG D   RDY+ IE + G+R W +R    G       WF
Sbjct: 431 TGWW-DGAD-VRRDYYLIETRSGQRGWAYRPVGEGGPLWLQGWF 472