Pairwise Alignments

Query, 537 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 471 a.a., DNA repair nucleotidyltransferase from Pseudomonas fluorescens FW300-N2E3

 Score =  107 bits (268), Expect = 8e-28
 Identities = 135/530 (25%), Positives = 208/530 (39%), Gaps = 75/530 (14%)

Query: 23  RILSIHFPHLPTDRVARSRWGASWLSRGRPDHPPVVFAAKIDNAMRLVALDTFAERIGLK 82
           R + I FP L  D V R R          PD P V+ +      + L A++  A  +GL+
Sbjct: 2   RWVCILFPQLALDAVLRQR--------SDPDEPLVLLSGPAQRRV-LQAVNAPARALGLR 52

Query: 83  RGQGAAEARAMCPSLDVIAADPAADQAFLEALADWCDRYTPLVALDGTDGLFLDITGCAH 142
            GQ    A+A+  +      D A  + + + LA W  R++  V++     +  +I     
Sbjct: 53  PGQSMTAAQALSKAFVSTDYDVAEIEHWQQFLAAWAYRFSSQVSVHYPRAVLFEIESSLG 112

Query: 143 LHGGEKALISDVLSRLFSLGVEARATVSSAAGLSWAVTRYGDADVIAPGDG-DPVLAPLP 201
           L G      + + + L +LG   R   +     +  +    D   +   D    +L  +P
Sbjct: 113 LFGPWPQFEARLRAELTALGFRHRLVAAPNPLAARVLANAYDGLAVPDNDALRQLLGQMP 172

Query: 202 VAALRLPADTAAALERVGLKQIGDLLEAPRAPLARRFGSSLLLRLDQARGFEDEPLSPRL 261
           V  + L    A AL R+GL+ +G +   PR  LARRF + +L  LD   G     L   L
Sbjct: 173 VERIGLEQTVATALSRMGLRTLGQVQALPRQTLARRFEAQVLKHLDTLLGERPLALGFYL 232

Query: 262 PVPSFSAERRLAEPLQDEEHILELTRHLARDVRSSLERHGEGGRLFELLLFRVDGRVFRV 321
           P   F     L   +Q  + +L   R L  D+ + L     G + F+L L          
Sbjct: 233 PPDRFDVRIELNFDVQSHQALLFPLRRLTGDLSAFLCGRDSGVQRFDLHL---------- 282

Query: 322 RAHAAVPLNDAVRIAALFRERLQAVHDDLDAGYGFEIVRLSVLRSERLD--------PAQ 373
             HA +P +  +++  L  ER  A+  +L  G   ++   + +R  RL         P +
Sbjct: 283 -EHAGLP-DTLIKVGLLSAERDPAMLFELARGRLEQVQVEAPVRGFRLSAQDLPSFVPQR 340

Query: 374 QD-FSGAPDESQPLAAFVDKVSARFGPGCLMQATLAESHLPERAGGFAAVTDVAAVLRTA 432
           ++ F   P +S P     +++ AR G   +        H PE            A L  A
Sbjct: 341 RELFDERPQQSLPWEQLRERLRARLGDEAVQGLGFQSDHRPE-----------CAWLPNA 389

Query: 433 ALEEKAFPE----NRPLRIFAHPEPV-EATAEVPEGAPRSFNWRKTRYRVARAEGPERIA 487
             + +A P      RP  +   P PV E TA +                     GPERI 
Sbjct: 390 --QPQACPARPDVQRPGWLLTEPLPVHEGTARI-------------------LMGPERIE 428

Query: 488 AEWWIDGEDHPTRDYFRIEDQEGRRFWLFREGLYGRETASPRWFMHGVFA 537
           + WW DG D   RDY+ IE + G + W +R        A P W + G FA
Sbjct: 429 SGWW-DGAD-VRRDYYLIETRTGSKAWAYRT----VGEAGPLW-LQGWFA 471