Pairwise Alignments

Query, 1116 a.a., DNA polymerase III subunit alpha from Sinorhizobium meliloti 1021

Subject, 1081 a.a., error-prone DNA polymerase from Ralstonia solanacearum IBSBF1503

 Score =  810 bits (2093), Expect = 0.0
 Identities = 481/1086 (44%), Positives = 648/1086 (59%), Gaps = 55/1086 (5%)

Query: 7    FCELGARTNFSFLEGAAPAEEMVVFAKKAGLAGLGIADRNSVAGVVRAHAKAKVEGYPFQ 66
            + EL   +NF+FL GA+   E+V  AK  G   L + D  SVAG VRAH  AK  G    
Sbjct: 20   YAELHCISNFTFLTGASHPHELVARAKVLGYWALALTDECSVAGTVRAHVAAKEAGLKLI 79

Query: 67   PGARLVFADGTPD----ILAYPKNRRGWGHLCRLLSAGNLRSKKGDCTLHLADLLEWQEE 122
             G+R    D   +    ++   ++  G+G+LC  ++   L + KGD  L   DL      
Sbjct: 80   VGSRFTVRDAQGEPWLRLVLLAQDIDGYGNLCECITQARLAAPKGDYRLLADDLAAPAAG 139

Query: 123  LL--------LIVMQGEGRPEPESLEVLLGTLKEHAGNRLYLGLA-PHYDGFDRHDFAVL 173
            L         L ++  +  P+P+ L       ++  G+RL + L  P     DRH   V 
Sbjct: 140  LAHLRGMPHCLAILLPDYDPDPQRLRAQALWCRQVFGDRLSMALELPLRHADDRHRGTV- 198

Query: 174  AAIARKAGIGLLATNDALYHDPHYRPLADVVTSIREHVPIAGAGFLLQKNAERHLKGPRE 233
            AA++ +A + L+AT D   H    +PL DV+T+IR   PIA  G  L  +AE+ ++   +
Sbjct: 199  AAVSEQADVPLVATGDVAMHSRQRKPLHDVLTAIRLSRPIAECGLELAPSAEQAMRTRMQ 258

Query: 234  MARLFSDYPEAIANTRKFFRELA----FSLDELSHQYPDENA-DGETPAESLRRLVAEGA 288
            +A  +     A    R    ELA    FSLDE+ ++YP E   +G TPA  L   V  GA
Sbjct: 259  LAFFYQGERGAPLLRRSV--ELASLCDFSLDEIEYEYPHEVVPEGLTPAAYLHAEVMAGA 316

Query: 289  AERYPEGVPEKVMRQIDYELELIHDKKYEPYFLTVHKLVKFARSVNILCQGRGSAANSSV 348
            A RY + +P KV  QI  EL LI + +YEP+FLTV+ +V+FARS +ILCQGRGSAANS+V
Sbjct: 317  ARRYGKAIPAKVQAQIAEELALIAELRYEPFFLTVYDVVRFARSRDILCQGRGSAANSAV 376

Query: 349  CFCLGITDVDPQKFTLLFDRFLSKDRDEPPDIDVDFEHERREEVIQYIYRTYGKEHAGLT 408
            C+CLGIT+VDP+    LF RFLS+ R+EPPDIDVDFEH+RREEVIQYIY  YG     L 
Sbjct: 377  CYCLGITEVDPESGNTLFARFLSRARNEPPDIDVDFEHQRREEVIQYIYGKYGLTRTALA 436

Query: 409  AAVISYRSRSAGREVAKAFGLSEDVQSALVSSIWGWGTSPFTEEQAKGAGLDAADPLTRR 468
            AA+I+YR+RSA R+V +A G+   V   +  +   W       + A   GLD   PL +R
Sbjct: 437  AALITYRTRSALRDVGRALGIDLGVIEQVAKAQAWWDGQHAFAQHAGQQGLDPESPLVQR 496

Query: 469  VLAYASLLMNFPRHLSQHVGGFVITRDRLDEVVPIMNTAMPDRYMIEWDKDDLDELKILK 528
                   L  FPRHLSQHVGGFVI + +L  +VPI N AM DR +I+WDKDDL+ L++LK
Sbjct: 497  WAGLVGQLRGFPRHLSQHVGGFVIAQGKLSRLVPIENAAMRDRRVIQWDKDDLESLRLLK 556

Query: 529  VDVLALGMLTCLAKGFKLLE------AHYG--EPITLAEIYQDHRDAVYDMICRADTVGV 580
            VDVLALGMLT + +   +L+      A YG  + + +  +  + RD  YDMI RA+T+GV
Sbjct: 557  VDVLALGMLTAIRRTLDMLDALPGRRARYGASDKLAMQHLPGEDRD-TYDMISRAETIGV 615

Query: 581  FQIESRAQMSMLPRLQPREMYDLVIEVAIVRPGPIQGNMVHPYLKRREAQRRG--EAVVY 638
            FQIESRAQ SMLPRL+PR  YDLVI+VAIVRPGPIQG MVHPYL+RREA R G  + V Y
Sbjct: 616  FQIESRAQQSMLPRLRPRTYYDLVIQVAIVRPGPIQGGMVHPYLQRREAMRNGNPDCVTY 675

Query: 639  PSPELKAVLERTLGVPLFQEQAMQIAITAAGFSPSEADRLRRAMATFKRTGTIHTFERKM 698
            P PE++AVLERTLGVP+FQEQ M+IA+ A GF+  EADRLRR MA +KR G +   + ++
Sbjct: 676  PGPEVRAVLERTLGVPIFQEQVMEIAMKAGGFTADEADRLRRDMAAWKRKGNLTEHQERL 735

Query: 699  VEGMV-ANDYEREFAERCFNQIKGFGEYGFPESHAASFASLVYASAWLKTYYPDIFCAAL 757
            ++ MV    Y+  F E    Q++GF EYGFPESHAA FA L Y S++LK + P  F AAL
Sbjct: 736  MKEMVEVRHYDPAFVEALCRQMEGFAEYGFPESHAAGFARLAYVSSYLKCHEPAAFFAAL 795

Query: 758  LNAQPMGFYAPAQLVRDAREHGVRMLPVDINHSDWDALLEGEGAFDKNAVHPRHASMREV 817
            LN+QPMGFY+P+QLV++AR   VR+LP D+  S WD+ L           H R       
Sbjct: 796  LNSQPMGFYSPSQLVQEARRSRVRVLPADVTVSAWDSTL-----------HERPPG---- 840

Query: 818  IKTRKAVRLGFRLVKGLKQTDMKALVARRGEG-YRSVHDLWLRSGLSRSVLERLADADAF 876
               +  +RLG   ++G++ +  + +VA R +  + SV DL  R+ L R  L  LA A+A 
Sbjct: 841  AGGQPDIRLGLSRIRGMRPSAAERIVAARAQAPFASVEDLAHRAVLDRHDLSVLAAANAL 900

Query: 877  RSIGLDRRAALWAVKALDEQSAVERLPLFEGAGSDDLQIEPKVALPDMPAGEQVIHDYRT 936
              +   RR ALW   AL E      L            +E  +ALP    GE+V+ DY +
Sbjct: 901  LPLAGHRRQALWQTLALQEPGQDHALL------RQARPVEAPLALPAPSLGEEVVADYGS 954

Query: 937  LTLSLKAHPVSFMREDFSRRGILRSRDLAATATGRWVTVAGLVLVRQRPGSANGVIFMTI 996
            L LSL++HP+S +R    R   + +  LA    G+     G+V VRQRPG+A G IF++I
Sbjct: 955  LGLSLQSHPLSLLRPRLERMRFVTAATLAGYRNGQLARACGIVTVRQRPGTAKGTIFVSI 1014

Query: 997  EDETGIANIIVWEKTFQKYRRQVMGSRLVKVRGRLQNQSGVIHVVADHLEDITPMLGLLR 1056
            EDETG+ N+++W +  ++ RR+V+ +RL+ V G  Q +    H+VA HL D+TP+LG L 
Sbjct: 1015 EDETGVVNVVLWPRLIERQRREVLHARLLGVYGAWQCERETRHLVAQHLVDLTPLLGRLA 1074

Query: 1057 REARRF 1062
              +R F
Sbjct: 1075 SSSRDF 1080