Pairwise Alignments

Query, 1116 a.a., DNA polymerase III subunit alpha from Sinorhizobium meliloti 1021

Subject, 1079 a.a., error-prone DNA polymerase from Ralstonia sp. UNC404CL21Col

 Score =  807 bits (2084), Expect = 0.0
 Identities = 474/1085 (43%), Positives = 646/1085 (59%), Gaps = 48/1085 (4%)

Query: 7    FCELGARTNFSFLEGAAPAEEMVVFAKKAGLAGLGIADRNSVAGVVRAHAKAKVEGYPFQ 66
            + EL   +NF+FL GA+   E+V  AK  G   L + D  SVAG  RA   +K       
Sbjct: 13   YAELHCISNFTFLTGASHPYELVERAKLYGYQALALTDECSVAGTARALVASKEYELKLI 72

Query: 67   PGARLVF--ADGTP--DILAYPKNRRGWGHLCRLLSAGNLRSKKGDCTLHLADLLEWQEE 122
             G+R     ADG P   ++   +N  G+G+L  +++   L + KG+  L   DL   + E
Sbjct: 73   IGSRFTVRNADGEPWLRLVLLAQNIEGYGNLSEIITHARLAAPKGEYRLLADDLAAPKGE 132

Query: 123  LL--------LIVMQGEGRPEPESLEVLLGTLKEHAGNRLYLGLA-PHYDGFDRHDFAVL 173
            L         L ++  +  P+P+ L       +   G+RL + L  P     DRH   V 
Sbjct: 133  LAHLRGVPDCLAILLPDYDPDPQQLLAQAWWCQRVFGDRLSIALELPLRHADDRHRGTV- 191

Query: 174  AAIARKAGIGLLATNDALYHDPHYRPLADVVTSIREHVPIAGAGFLLQKNAERHLKGPRE 233
             A++ +  + ++AT+    H    +PL DV+T+IR   P++  G  L  +AE+ ++   +
Sbjct: 192  GAVSEQIDVPMVATSGVQMHTRQRKPLHDVLTAIRLSKPLSECGLELAPSAEQAMRTRVQ 251

Query: 234  MARLFSDY--PEAIANTRKFFRELAFSLDELSHQYPDENA-DGETPAESLRRLVAEGAAE 290
            ++ L+        +  T +      FSLDE+ ++YP E   +G TPAE L      GAA 
Sbjct: 252  LSYLYQGERGKRILRRTVELAALCNFSLDEIQYEYPSEVVPEGMTPAEYLHAETLAGAAR 311

Query: 291  RYPEGVPEKVMRQIDYELELIHDKKYEPYFLTVHKLVKFARSVNILCQGRGSAANSSVCF 350
            RYP GV EKV  QI  EL LI +  YEP+FLTV+ +VKFAR+  ILCQGRGSAANS+VC+
Sbjct: 312  RYPNGVSEKVREQIQEELGLIAELGYEPFFLTVYDVVKFARNEGILCQGRGSAANSAVCY 371

Query: 351  CLGITDVDPQKFTLLFDRFLSKDRDEPPDIDVDFEHERREEVIQYIYRTYGKEHAGLTAA 410
            CLGIT+V+P     LF RFLS+ R+EPPDIDVDFEH+RREEVIQYIY+ YG     L AA
Sbjct: 372  CLGITEVNPDSGNTLFARFLSRARNEPPDIDVDFEHQRREEVIQYIYKKYGVTRTALAAA 431

Query: 411  VISYRSRSAGREVAKAFGLSEDVQSALVSSIWGWGTSPFTEEQAKGAGLDAADPLTRRVL 470
            +I+YR+RSA R+V +A G+   +   +      W +     ++A   GLD   PL  R  
Sbjct: 432  LITYRTRSALRDVGRALGIDLGIIEQVAKGQAWWDSRKEFVQRAGQQGLDPESPLVLRWA 491

Query: 471  AYASLLMNFPRHLSQHVGGFVITRDRLDEVVPIMNTAMPDRYMIEWDKDDLDELKILKVD 530
                 L  FPRHLSQHVGGFVI + +L  +VPI N AM +R +I+WDKDDL+ L++LKVD
Sbjct: 492  QLVDQLRGFPRHLSQHVGGFVIAQGKLSRLVPIENAAMENRRVIQWDKDDLESLRLLKVD 551

Query: 531  VLALGMLTCLAKGFKLLEA------HYGEPITLA-EIYQDHRDAVYDMICRADTVGVFQI 583
            VLALGMLT + +   +++A      HYG    LA +   D     YDMICRA+T+GVFQI
Sbjct: 552  VLALGMLTAIRRTLDMVDALPGRREHYGATTKLAMQNLHDGDKKTYDMICRAETIGVFQI 611

Query: 584  ESRAQMSMLPRLQPREMYDLVIEVAIVRPGPIQGNMVHPYLKRREAQRRG--EAVVYPSP 641
            ESRAQ SMLPRL+PRE YDLVI+VAIVRPGPIQG MVHPYL+RREA+R G  + V YP P
Sbjct: 612  ESRAQQSMLPRLRPREYYDLVIQVAIVRPGPIQGGMVHPYLQRREAKRNGNTDCVTYPGP 671

Query: 642  ELKAVLERTLGVPLFQEQAMQIAITAAGFSPSEADRLRRAMATFKRTGTIHTFERKMVEG 701
            E+KAVLERTLGVP+FQEQ M+IA+ A  F+P +ADRLRR MA +KR G +   + ++V  
Sbjct: 672  EVKAVLERTLGVPIFQEQVMEIAMKAGDFTPDDADRLRRDMAAWKRKGNLTQHQERLVHA 731

Query: 702  MV-ANDYEREFAERCFNQIKGFGEYGFPESHAASFASLVYASAWLKTYYPDIFCAALLNA 760
            MV    Y+  F E    Q++GF EYGFPESHAA FA L Y S++LK + P  F AALLN+
Sbjct: 732  MVEKRGYDPAFVEALCKQMEGFAEYGFPESHAAGFAKLAYVSSFLKCHEPAAFFAALLNS 791

Query: 761  QPMGFYAPAQLVRDAREHGVRMLPVDINHSDWDAL--LEGEGAFDKNAVHPRHASMREVI 818
            QPMGFY+P+QLV++AR   VR+LP D+  S WD+   L  +G   +N +           
Sbjct: 792  QPMGFYSPSQLVQEARRSHVRVLPADVTASVWDSTLHLRADGEVGENGL----------- 840

Query: 819  KTRKAVRLGFRLVKGLKQTDMKALVARRGEG-YRSVHDLWLRSGLSRSVLERLADADAFR 877
              +  +RLG   ++G+++   + + A R +  + SV DL  R+ L R  L  LA A+A +
Sbjct: 841  -VQPDIRLGLNRIRGMRKPAAERIEAARAQAPFTSVEDLAHRAALDRHDLNVLAAANALK 899

Query: 878  SIGLDRRAALWAVKALDEQSAVERLPLFEGAGSDDLQIEPKVALPDMPAGEQVIHDYRTL 937
            S+   RR ALW   AL E      L            +E  + LP  P GE+V+ DY +L
Sbjct: 900  SLAGHRRQALWQTLALQEPGHDHALL------RQARPVEAPLELPAPPIGEEVMADYGSL 953

Query: 938  TLSLKAHPVSFMREDFSRRGILRSRDLAATATGRWVTVAGLVLVRQRPGSANGVIFMTIE 997
             LSL++HP+  +R    R     +  LA    G+     G+V VRQRPG+ANG IF++IE
Sbjct: 954  GLSLQSHPLRLLRARLERMRFATAATLAGYRNGQLARACGIVTVRQRPGTANGTIFVSIE 1013

Query: 998  DETGIANIIVWEKTFQKYRRQVMGSRLVKVRGRLQNQSGVIHVVADHLEDITPMLGLLRR 1057
            DETG  N+I+W    ++ RR+V+ ++L+ V G+ Q +    H+VA HL D+TP+LG L  
Sbjct: 1014 DETGAINVILWPHLIERQRREVLNAQLLGVYGKWQCERETRHLVAQHLVDLTPLLGRLAT 1073

Query: 1058 EARRF 1062
             +R F
Sbjct: 1074 SSRDF 1078