Pairwise Alignments

Query, 1116 a.a., DNA polymerase III subunit alpha from Sinorhizobium meliloti 1021

Subject, 1193 a.a., DNA polymerase III subunit alpha from Burkholderia phytofirmans PsJN

 Score =  779 bits (2012), Expect = 0.0
 Identities = 485/1196 (40%), Positives = 660/1196 (55%), Gaps = 164/1196 (13%)

Query: 7    FCELGARTNFSFLEGAAPAEEMVVFAKKAGLAGLGIAD---------------------- 44
            + EL   TNFSFL GA+   E+V  A   G + L I D                      
Sbjct: 21   YAELHCLTNFSFLRGASHPHELVEQAMSRGYSALAITDECSLAGVVRAHTALKEIKTERE 80

Query: 45   -----RNSVAGVVRAHAKAK-----------------VEGYPFQP------GARLVFADG 76
                 R   A   ++ A ++                  E    +P      G+ L   D 
Sbjct: 81   RQQKEREDKANTAQSEAPSEDGTQIEASQQETAPQETAEAEAPKPLPHLIIGSELNLTDE 140

Query: 77   TPD----ILAYPKNRRGWGHLCRLLSAGNLRSKKGDCTL----------HLADLLEWQEE 122
            T D    ++A   NR G+G+L  L++    R+ KG   L          HLA L    + 
Sbjct: 141  TGDPFCTLVALATNRNGYGNLSELITLARSRADKGSYRLGPSDFTASLPHLAHLKTLPDC 200

Query: 123  LLLIVMQGEGRPEPESLEVLLGTLK------EHAGNRLYLGLAPHYDGFDRHDFAVLAAI 176
            +L++V        P+    L  TL+        A  R ++ L     G D      L  I
Sbjct: 201  VLMLV--------PQRTATLSHTLRCAHWLASFAAQRAWIALELWQTGSDDLQIDALRMI 252

Query: 177  ARKAGIGLLATNDALYHDPHYRPLADVVTSIREHVPIAGAGFLLQKNAERHLKGPREMAR 236
            ++ +G+ L+A    L H    +PL D +T+I    P++  G  L+ NAERH+   R   R
Sbjct: 253  SKASGLPLVAAGGVLMHARSRKPLQDTMTAIGLVTPLSQCGHALEANAERHM---RTRVR 309

Query: 237  LFSDYP-EAIANTRKFFRELAFSLDELSHQYPDENAD-GETPAESLRRLVAEGAAERYPE 294
            L   YP + +  T +      FSLDEL ++YP+E    GE+P+  LR+LV  GA ER+P+
Sbjct: 310  LGKLYPRDTLEETLRIAALCRFSLDELKYEYPEELVPAGESPSSYLRKLVMAGAMERWPK 369

Query: 295  GVPEKVMRQIDYELELIHDKKYEPYFLTVHKLVKFARSVNILCQGRGSAANSSVCFCLGI 354
            G+  K + QI+ EL LI D KYE YFLTVH +V FARS NILCQGRGSAANS VC+CL +
Sbjct: 370  GIDLKRIGQIEKELGLIADLKYEKYFLTVHDIVSFARSRNILCQGRGSAANSIVCYCLHV 429

Query: 355  TDVDPQKFTLLFDRFLSKDRDEPPDIDVDFEHERREEVIQYIYRTYGKEHAGLTAAVISY 414
            T++DP    +L +RF+S+ R+EPPDIDVDFEH+RREEVIQYIY  YG+  A LTA++I+Y
Sbjct: 430  TEIDPVHMNMLIERFISRARNEPPDIDVDFEHQRREEVIQYIYTKYGRHRAALTASLITY 489

Query: 415  RSRSAGREVAKAFGLSEDVQSALVSSIWGWGTSPFTEEQAKGAGLDAADPLTRRVLAYAS 474
             +RSA ++V KA GL   +   +  S   W  +    +    AG DA   +T+ ++    
Sbjct: 490  HARSALKDVGKALGLEVSLIERISKSQQWWDGTDAVAKYLAEAGFDANSHITQNLIRLTK 549

Query: 475  LLMNFPRHLSQHVGGFVITRDRLDEVVPIMNTAMPDRYMIEWDKDDLDELKILKVDVLAL 534
             L  FPRHLSQHVGGFVI +D+L  +VPI N  M DR +IEWDKDD+D LK+LKVDVLAL
Sbjct: 550  ELRAFPRHLSQHVGGFVIAKDKLSRLVPIENATMKDRSVIEWDKDDIDALKLLKVDVLAL 609

Query: 535  GMLTCLAKGFKLLEAHYGEP-ITLAEIYQDHRDAVYDMICRADTVGVFQIESRAQMSMLP 593
            GML+ + +  + +    G P  ++ +I ++ R AVY+M   ADT+GVFQIESRAQ SMLP
Sbjct: 610  GMLSAIRRALEFVALRRGFPKFSVQDIPREDR-AVYEMCGHADTIGVFQIESRAQQSMLP 668

Query: 594  RLQPREMYDLVIEVAIVRPGPIQGNMVHPYLKRREAQRRGEAVVYPSPELKAVLERTLGV 653
            RL+P + YDLVIEVAIVRPGPIQG MVHPYL+R++     EAV Y   EL+ VLERTLGV
Sbjct: 669  RLKPNKYYDLVIEVAIVRPGPIQGGMVHPYLRRKQGL---EAVDYAKDELRPVLERTLGV 725

Query: 654  PLFQEQAMQIAITAAGFSPSEADRLRRAMATFKRTGTIHTFERKMVEGMVANDYEREFAE 713
            P+FQEQ M +A+ AA ++  +AD+LRRAMA ++R+G +  +++ + E M+   YE+EF +
Sbjct: 726  PIFQEQVMHLAMVAAKYTGEQADQLRRAMAAWRRSGNLAKYQKDLNERMLKRGYEQEFID 785

Query: 714  RCFNQIKGFGEYGFPESHAASFASLVYASAWLKTYYPDIFCAALLNAQPMGFYAPAQLVR 773
            R   QI+GFGEYGFPESHAASFA LVY SAWLK Y P  F A LLN+QP+GFY+P+QLV+
Sbjct: 786  RICKQIEGFGEYGFPESHAASFALLVYLSAWLKRYEPAAFLAGLLNSQPLGFYSPSQLVQ 845

Query: 774  DAREHGVRMLPVDINHSDWDALLEGEG------AFDKNAVHPRHA----------SMREV 817
            DA+ HGV +LP D+  SDW++  E  G      + D+  +H + A          S+R +
Sbjct: 846  DAKRHGVEVLPPDVTLSDWESTFERRGHEGQRISADETCLHRQQAVLSAQQLRDLSLRRL 905

Query: 818  IKTR------------------------KAVRLGFRLVKGLKQTDMKALVARRGEG-YRS 852
              +R                         AVR+G  L+KG  Q   + ++A R E  +  
Sbjct: 906  TVSRTVRRAAQRLTARVFQPSHTYGARGPAVRIGMHLIKGFSQAAAERIMAARNEAPFTD 965

Query: 853  VHDLWLRSGLSRSVLERLADADAFRSIGLDRRAALWAVKALDEQSAVERLPLFEGAGSDD 912
            V DL  R+ L+R  LE LA A+A  SI   RR A WAV A   Q  V +L        D 
Sbjct: 966  VDDLARRAALTRRDLEALAAANALVSIAGHRREAWWAVTA---QHTVPKLL------RDA 1016

Query: 913  LQIEPKVALPDMPAGEQVIHDYRTLTLSLKAHPVSFMREDFSRRGILRSRDLAATATGRW 972
               E  + LP      +++ DY +L L+L  HP++ +R   ++     + +LAA   G  
Sbjct: 1017 PIAEAPLMLPQAAESREIVDDYASLGLTLNRHPLALLRARLAQHRFRTAAELAACQHGTL 1076

Query: 973  VTVAGLVLVRQRPGSANGVIFMTIEDETGIANIIVWEKTFQKYRRQVMGSRLVKVRGRLQ 1032
                G+V VRQRPG+ANG +F++IEDETG  N+IVW    +K R+ ++G+ L+ V G LQ
Sbjct: 1077 ARACGIVTVRQRPGTANGTVFVSIEDETGSINVIVWPSLVEKQRKVLLGASLLAVYGVLQ 1136

Query: 1033 NQSG--------------------------VIHVVADHLEDITPMLGLLRREARRF 1062
               G                          VIH+VA  LED +  LG L   +R F
Sbjct: 1137 RDDGVATGGDQAGNGVSANQAKGKRKNKGEVIHLVAHRLEDHSEWLGELATASRDF 1192