Pairwise Alignments

Query, 409 a.a., integrase DNA protein from Sinorhizobium meliloti 1021

Subject, 418 a.a., Phage integrase from Pseudomonas fluorescens FW300-N2E2

 Score =  116 bits (290), Expect = 1e-30
 Identities = 110/409 (26%), Positives = 176/409 (43%), Gaps = 30/409 (7%)

Query: 1   MPIN--KLTDKQVRGIKKPGNH---PDGGNLYLRVRENGSK--SFIVKATIDKKQREWTI 53
           MP N  +L+D+Q++ +K  G      DG  L LRVR +GS   +F  +  + + +    +
Sbjct: 1   MPTNATRLSDRQLKAVKATGKDFVLSDGDGLQLRVRASGSMMWNFNYREPLTRSRINMAL 60

Query: 54  GSYGSEEHHFSLAEARKRRDEIMAVIRAGGISEPTGKSVTQSVEPEST-TFPAPLFGPFS 112
           G Y       SLA ARK+  E   ++  G   +     V  +   E+  TF       F 
Sbjct: 61  GPYPD----LSLANARKKAVEARELLALGIDPKAQRDEVRHAKLAETEHTFEKVATAWFE 116

Query: 113 IELIQQIEGGFRNAKHRAQWRSTLETYCKSIWEKRVDRITTDDVLAILRPIWSTKAETAS 172
           ++     +     A     WRS       S+    + +IT   V+ ILRPI   +A+ + 
Sbjct: 117 LK-----KDSVTKAYGEDIWRSLTLHVLPSMKTTPLSQITAPMVIKILRPI---EAKGSL 168

Query: 173 RVRGRIERVLNAAKVRGFRSGENPAAWQGHLQLLLPKRQKLQRGHHPALPFQDLPTLWQK 232
               R+ + LN     G  SG     +   L  +    +K ++ +  ALP ++LP L  +
Sbjct: 169 ETVKRLSQRLNEIMTYGVNSG---LIFANPLNGIRAVFKKPKKENMAALPPEELPELMME 225

Query: 233 LT--SIDTIASAALQFLILTAARSGELRGAKWEEFDLEKRLWTIPASRMKAAREHLVPLS 290
           +   SI       +++ + T  R  E    +W + D  KR+WTIP  RMK  R H +PL+
Sbjct: 226 IANASIKRTTRCLIEWQLHTMTRPAEAATTRWADIDFNKRIWTIPPERMKKRRPHTIPLT 285

Query: 291 DSCIEILKRMQKIR-HSDFVFPGTRE---HAPLSDMTLSKVLHGLCKGYTVHGFRSTFRD 346
           D  + +L+ ++++  + ++VFP  R    HA      ++    G       HG RS    
Sbjct: 286 DQALALLETLKQLSGNREYVFPSDRNPRTHANSQTANMALKRMGFQDRLVSHGLRSMAST 345

Query: 347 WCGEKTDFSREHAEACLAHTIGSAVERAYRRGNSLEPRRRIMTAWEAFI 395
              E   +  E  E  LAH     V  AY R + +E RR +M  W   I
Sbjct: 346 ILNEH-GWDPELIEVALAHVDKDEVRSAYNRTDYIERRRPMMAWWSEHI 393