Pairwise Alignments

Query, 409 a.a., integrase DNA protein from Sinorhizobium meliloti 1021

Subject, 420 a.a., site-specific recombinase, phage integrase family protein from Klebsiella michiganensis M5al

 Score =  118 bits (295), Expect = 4e-31
 Identities = 119/424 (28%), Positives = 186/424 (43%), Gaps = 62/424 (14%)

Query: 5   KLTDKQVRGIK---KPGNHPDGGNLYLRVRENGSKSFIVK--ATIDKKQREWTIGSYGSE 59
           KL  +QV   K   K     DGG LYL V   GSK + +K     DKK+     G + + 
Sbjct: 2   KLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPT- 60

Query: 60  EHHFSLAEARKRRDEIMAVIRAGGISEPTGKSVTQSVEP--ESTTFPAPLFGPFSIELIQ 117
               +LA+AR +RDE               K + Q ++P  E     A   G ++ E I 
Sbjct: 61  ---VTLAQARAKRDEAK-------------KLLVQGIDPKAEQKEAQAENSGAYTFETIA 104

Query: 118 QIEGGFRNAK----HRAQWRSTLETYC-KSIWEKRVDRITTDDVLAILRPI-WSTKAETA 171
           + E    N +    HR++    LE Y    I    + ++ T  +LA ++ +  S K + A
Sbjct: 105 R-EWHASNKRWSEDHRSRVLRYLELYIFPYIGTSDIRQLKTSHLLAPIKKVDASGKHDVA 163

Query: 172 SRVRGRIERVLNAAKVRGFRSGENPAAWQGHLQLLLPKRQKLQRGHHPALPFQDLPTLWQ 231
            R++ R+  ++  A    +      +   G L     +       H+PALP    P    
Sbjct: 164 QRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKAR-------HYPALPSSRFPEFLA 216

Query: 232 KLTSID--TIASAALQFLILTAARSGELRGAKWEEFDLEKRLWTIPASR----------- 278
           +L +     +   A++  +LT  RS ELR A+WEEFD +K LW +PA R           
Sbjct: 217 RLAAYRGRVMTRIAVELSLLTFVRSSELRFARWEEFDFDKSLWRVPAKREEIKGVRYSYR 276

Query: 279 -MKAAREHLVPLSDSCIEILKRMQKIR-HSDFVFPGTREHAP-LSDMTLSKVLHGLCKGY 335
            MK   EH+VPLS   + +L ++++I    + +FPG  +    +S+ T++  L  +  GY
Sbjct: 277 GMKMKEEHIVPLSRQAMILLAQLKQISGDKELLFPGDHDATKVMSENTVNSALRAM--GY 334

Query: 336 TV------HGFRSTFRDWCGEKTDFSREHAEACLAHTIGSAVERAYRRGNSLEPRRRIMT 389
                   HGFR+  R   GE   +S +  E  L+H+  + V  AY   +     RR+M 
Sbjct: 335 DTKTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSEHLDERRLMV 394

Query: 390 AWEA 393
            W A
Sbjct: 395 QWWA 398