Pairwise Alignments

Query, 539 a.a., monovalent cation/H+ antiporter subunit D from Sinorhizobium meliloti 1021

Subject, 496 a.a., proton-translocating NADH-quinone oxidoreductase, chain M from Synechococcus elongatus PCC 7942

 Score =  103 bits (256), Expect = 2e-26
 Identities = 111/428 (25%), Positives = 181/428 (42%), Gaps = 34/428 (7%)

Query: 79  GIVLVLDRLSALMLCLTSGLALAAQAYSMARWHTAGHHFHSLFQLLVAGLNGAFLTGDLF 138
           G  L +D LS  ++ L + L     A  + R       ++ L  LL   ++GAFL  DL 
Sbjct: 72  GYRLGVDGLSLPLVGLNALLTFLIIA-GLERQEQRSRLYYGLMLLLSGAVSGAFLAQDLL 130

Query: 139 NLFVFFEMMLAASYGLLLHGSGPLRVKAGLHYIAVNLAASALFLIGVSLIYGAAGTLNMA 198
             FVF+E+ L   Y L+    G  R  A   ++     + AL LIG   +   +G  + A
Sbjct: 131 LFFVFYEVELIPLYLLISIWGGARRGYAATKFLIYTALSGALLLIGFLALTILSGAGSFA 190

Query: 199 DLATKLAALEPRSRTLVEMGSAILGVAFLVKAGMWPLSFWLPTAYAAATPPVAGVFA-VL 257
                LAA+ P ++ +  +   ++ VAF +K  + P   WLP A+  A+ PV+ + A VL
Sbjct: 191 -YNPNLAAVLPIAQQVTLL--VLILVAFGIKTPIVPFHTWLPDAHVEASTPVSMMLAGVL 247

Query: 258 TKVGIYVIIRLHLLVFGTAAGASSGFGQEWLVTGGMLTIAFGGIGVLASQAMGRLAGYSV 317
            K+G Y I+R  L +F       +     WL    +++  +G +  +  Q M ++  YS 
Sbjct: 248 LKLGTYGILRFGLGLFPQVWPIVA----PWLAGLAVVSTLYGSLSAIVQQDMKKMVAYSS 303

Query: 318 LVSSGTLLAAVGLGHDGMLAGALFYLVSSTLTIGAFFLLIELVERGRDAGADVLAVTMEA 377
           +   G +L A        L GA+  ++S  L     FL +  V   R    D+  +    
Sbjct: 304 IGHMGYILLAAAAATPLSLLGAVCQMISHGLISALLFLEVGFV-YSRTGTRDLRVL---- 358

Query: 378 YGDFDEDEEEEEVGAAIPGTMAVLGLCFCLCALLLAGLPPLSGFIAKFALISGLFDMPAA 437
                +     E G  I G++ +L +      +   GLP + GFIA+F +  G F     
Sbjct: 359 -----QGLLTPERGLPIVGSLMILAV------MASGGLPGMVGFIAEFMIFRGSFSTFTV 407

Query: 438 ELATAMSAADWTYVTLLILSGLAAMIAMNRIGIRTFWASIEGTIPRVVVIEITPVVVLLG 497
           +    M     T V  L+L        +NR         +E T+P V + E  P ++L  
Sbjct: 408 QTLFCMVGTGLTSVYFLLL--------VNRAFFGRLPDQME-TLPNVALREHIPALMLAT 458

Query: 498 ACIFLSLQ 505
             +   +Q
Sbjct: 459 LIVIFGVQ 466