Pairwise Alignments

Query, 394 a.a., flagellin A from Sinorhizobium meliloti 1021

Subject, 377 a.a., flagellin D from Vibrio cholerae E7946 ATCC 55056

 Score = 95.1 bits (235), Expect = 3e-24
 Identities = 99/399 (24%), Positives = 167/399 (41%), Gaps = 36/399 (9%)

Query: 3   SILTNNSAMAALSTLRSISSSMEDTQSRISSGLRVGSASDNAAYWSIATTMRSDNQALSA 62
           ++ TN +AM A   L   +++ + +  R+SSG ++ SA D+AA   I+  +   ++ L  
Sbjct: 4   NVNTNVAAMTAQRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63

Query: 63  VQDALGLGAAKVDTAYSGMESAIEVVKEIKAKLVAATEDGVDKAK---IQEEITQLKDQL 119
                  G +   TA   M     +++ ++   + +      K++   IQEEIT L D+L
Sbjct: 64  AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDEL 123

Query: 120 TSIAEAASFSGENWLQADLSGGPVTKSVVGGFVRDSSGAVSVKKVDYSLNTDTVLFDTTG 179
             IAE  SF G   L    S    TKS   G   D+  AV +   D  + +D  +   T 
Sbjct: 124 NRIAETTSFGGNKLLNGTFS----TKSFQIG--ADNGEAVMLTLKD--MRSDNRMMGGTS 175

Query: 180 NTGI--LDKVYNVSQAS--VTLPV-NVNGTTSEYTVGAYNVDDLIDASATFDGDYANVGA 234
                  DK + V   +  +T  + +++G     TV A   DD+ + +            
Sbjct: 176 YVAAEGKDKDWKVQAGANDITFTLKDIDGNDQTITVNAKEGDDIEEVAT----------- 224

Query: 235 GALAGDYVKVQGSWVKAVDVAATGQEVVYDDGTTKWGVDTTVTGAPATNVAAPASIA-TI 293
                 Y+  Q   VKA  V   GQ  ++  G  K   D   +G  A  +   A  A T+
Sbjct: 225 ------YINGQTDMVKA-SVNEKGQLQIFA-GNNKVTGDVAFSGGLAGALNMQAGTAETV 276

Query: 294 DITIAAQAGNLDALIAGVDEALTDMTSAAASLGSISSRIDLQSDFVNKLSDSIDSGVGRL 353
           D       G     +A +D AL  + S  A LG+  +R +     ++ +++++++   R+
Sbjct: 277 DTIDVTSVGGAQQSVAVIDSALKYVDSHRAELGAFQNRFNHAISNLDNINENVNASKSRI 336

Query: 354 VDADMNEESTRLKALQTQQQLAIQALSIANSDSQNVLSL 392
            D D  +E+T L   Q   Q +   L+ A       LSL
Sbjct: 337 KDTDFAKETTALTKSQILSQASSSVLAQAKQAPNAALSL 375