Pairwise Alignments

Query, 394 a.a., flagellin A from Sinorhizobium meliloti 1021

Subject, 296 a.a., flagellin domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 66.6 bits (161), Expect = 9e-16
 Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 19/169 (11%)

Query: 3   SILTNNSAMAALSTLRSISSS---MEDTQSRISSGLRVGSASDNAAYWSIATTMRSD--- 56
           S++ N++ MA ++  R++SSS   +  +  R+SSGLRVG+ASD+AA  +I   MRSD   
Sbjct: 2   SLVINHNLMA-MNAARNLSSSYGNLSTSVRRLSSGLRVGAASDDAAGLAIRELMRSDIAA 60

Query: 57  -NQALSAVQDALGLGAAKVDTAYSGMESAIEVVKEIKAKLVAATEDGVDKAKIQEEITQL 115
            NQ +    DA+ L     D A   ++  +  +KE+  +    T     +  I  E   +
Sbjct: 61  LNQGVRNANDAISL-IQTADGALGVIDEKLIRMKELAEQAATGTYTSDQRLIIDSEYQAM 119

Query: 116 KDQLTSIAEAASFSGENWLQADLSGGPVTKSVVGGFVRDSSGAVSVKKV 164
             ++T IA +  F+G + L  +LSG             D SG VS  K+
Sbjct: 120 ASEITRIANSTDFNGIHLLNGNLSGA----------THDGSGLVSTGKL 158



 Score = 40.8 bits (94), Expect = 5e-08
 Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 5/111 (4%)

Query: 274 TTVTGAPATNVAAPASIATIDITIAAQAGNLDALIAGVDEALTDMTSAAASLGSISSRID 333
           +T +     + AA     +I    AAQA      + G++ A+       A+LG++ +R++
Sbjct: 180 STASALGVGSQAAEGKGKSISTQSAAQAA-----LEGIENAIISKDKIRANLGALQNRLE 234

Query: 334 LQSDFVNKLSDSIDSGVGRLVDADMNEESTRLKALQTQQQLAIQALSIANS 384
                +   S+++ +   R+ D D++ E T     Q   Q A+  LS ANS
Sbjct: 235 NTISNLQIQSENLQAAESRISDVDVSSEMTEFTRQQILTQAAVAMLSQANS 285