Pairwise Alignments

Query, 326 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 340 a.a., Inositol transport system permease protein from Pseudomonas fluorescens FW300-N1B4

 Score =  166 bits (421), Expect = 6e-46
 Identities = 106/317 (33%), Positives = 173/317 (54%), Gaps = 20/317 (6%)

Query: 12  LLVVAIAVLLALIA--LRFPAFVAPSN-LARVYSDTSILVILALGQMAVILTRCIDLSMA 68
           L+++ I ++  +    +R  +F+  S  L  +    SI+ +LA+G   VI+T  IDLS  
Sbjct: 28  LVLIGIGLVFEMFGWIVRDQSFLMNSQRLVLMILQVSIIGLLAIGVTQVIITTGIDLSSG 87

Query: 69  ANLALCGMVAAMLNNA-------FPGL---PIPLIIVAVMALGGFLGSINGTLVWKLNIP 118
           + LAL  M+AA L          FP L   P+ + ++  + +G   G+ING+++    IP
Sbjct: 88  SVLALSAMIAASLAQTSDFARAVFPSLTDLPVWIPVIVGLGVGLLAGAINGSIIAITGIP 147

Query: 119 PIVVTLGTLTIYRGLIFVLTNGKWINAHEMSDAFKALPRLDVAGMPVLSWLSLVIVALMF 178
           P + TLG +   RGL    T G+ ++   +SD++ A+       MPV+  + LV+  +  
Sbjct: 148 PFIATLGMMVSARGLARYYTEGQPVSM--LSDSYTAIGH---GAMPVI--IFLVVAVIFH 200

Query: 179 LVMGRTPLGRAFYAVGGNPHAAVYTGIDVGRTRFFAYCLSGALAGLSGYLWVSRYAVAYV 238
           + +  T  G+  YA+GGN  AA  +GI+V R     Y ++G LAGL+G +  +R A    
Sbjct: 201 IALRYTKYGKYTYAIGGNMQAARTSGINVKRHLVIVYSIAGLLAGLAGVVASARAATGQA 260

Query: 239 DIAAGFELDIIAACVIGGISIAGGIGSVAGAVLGALFLGVIKNALPVINISPFAQLAISG 298
            +   +ELD IAA VIGG S+AGG+G + G V+GAL LGV+ +    + +  + Q  I G
Sbjct: 261 GMGMSYELDAIAAAVIGGTSLAGGVGRITGTVIGALILGVMASGFTFVGVDAYIQDIIKG 320

Query: 299 TVIIIAVAVNARAERRK 315
            +I++AV ++    +RK
Sbjct: 321 LIIVVAVVIDQYRNKRK 337