Pairwise Alignments

Query, 326 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  183 bits (465), Expect = 4e-51
 Identities = 107/299 (35%), Positives = 169/299 (56%), Gaps = 8/299 (2%)

Query: 14  VVAIAVLLALIALRFPAFVAPSNLARVYSDTSILVILALGQMAVILTRCIDLSMAANLAL 73
           ++A+  L+ +++   P F    NL  +   TS+  I+A+G   VILT  IDLS+ + LAL
Sbjct: 35  LIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAGIDLSVGSVLAL 94

Query: 74  CGMVAAMLNNAFPGLPIPLIIVAVMAL--GGFLGSINGTLVWKLNIPPIVVTLGTLTIYR 131
           CG  AA L      + +P+++    AL  G  LG+I+G ++ K  +   + TL T+T+ R
Sbjct: 95  CGAFAATL----VAMEVPVLVAVPTALLAGAALGAISGIIIAKGKVQAFIATLVTMTLLR 150

Query: 132 GLIFVLTNGKWINAH--EMSDAFKALPRLDVAGMPVLSWLSLVIVALMFLVMGRTPLGRA 189
           G+  V T+G+ I+    + +D F         G+PV  WL +V+ A  + ++  T  GR 
Sbjct: 151 GVTMVYTDGRPISTGFTDTADTFAWFGTGYTLGIPVPVWLMVVVFAGAWYLLNHTRFGRY 210

Query: 190 FYAVGGNPHAAVYTGIDVGRTRFFAYCLSGALAGLSGYLWVSRYAVAYVDIAAGFELDII 249
            YAVGGN  A   +GI+V R +   Y + G LA L+G +  SR + A      G+ELD I
Sbjct: 211 VYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSSAQPTAGMGYELDAI 270

Query: 250 AACVIGGISIAGGIGSVAGAVLGALFLGVIKNALPVINISPFAQLAISGTVIIIAVAVN 308
           AA V+GG S+ GG G + G ++GAL +G + NAL ++++S + Q+     VI++AV V+
Sbjct: 271 AAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMIAKAVVILLAVLVD 329