Pairwise Alignments

Query, 326 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 330 a.a., sugar ABC transporter permease from Pseudomonas fluorescens SBW25-INTG

 Score =  182 bits (462), Expect = 1e-50
 Identities = 112/312 (35%), Positives = 172/312 (55%), Gaps = 4/312 (1%)

Query: 2   MARLLKNREILLVVAIAVLLALIALRFPAFVAPSNLARVYSDTSILVILALGQMAVILTR 61
           +ARL+++      V + V+  ++ L    F+  SNL+ +    SI  I+A+G   VILT 
Sbjct: 23  LARLVRSPAFYPFVGLVVVTVVMILASDTFLTASNLSNIARQVSINAIIAVGMTCVILTG 82

Query: 62  CIDLSMAANLALCGMVAAMLNNAFPGLPIPLIIVAVMALGGFLGSINGTLVWKLNIPPIV 121
            IDLS+   +AL G + A L  A  GLP  L I A M +G   G  NG  V  L++PPI+
Sbjct: 83  GIDLSVGPVMALSGTLTAGLMVA--GLPPGLAIGAGMLIGVAFGIGNGLFVAYLHMPPII 140

Query: 122 VTLGTLTIYRGLIFVLTNGKWINAHEMSDAFKALPRLDVAGMPVLSWLSLVIVALMFLVM 181
           VTL T+ I RGL  + T+G  I+   + D F    R  + G+ V   + L+     ++++
Sbjct: 141 VTLATMGIARGLGLMYTDGYPISG--LPDWFAFFGRESLFGIQVPILIMLLTYLAAYVLL 198

Query: 182 GRTPLGRAFYAVGGNPHAAVYTGIDVGRTRFFAYCLSGALAGLSGYLWVSRYAVAYVDIA 241
             T +GR  YA+GGN  A   +G+   R +   Y +SG  A ++G +  SR      +  
Sbjct: 199 QHTRIGRYIYAIGGNEEAVRLSGVRAARFKLLVYGISGLTAAIAGLVLTSRLMSGQPNAG 258

Query: 242 AGFELDIIAACVIGGISIAGGIGSVAGAVLGALFLGVIKNALPVINISPFAQLAISGTVI 301
             FELD IAA V+GG SIAGG G + G +LGA+ LGV+ N L ++ +SP+ Q  I G +I
Sbjct: 259 VSFELDAIAAVVLGGASIAGGRGVIVGTLLGAMLLGVLNNGLNMLGVSPYVQSVIKGGII 318

Query: 302 IIAVAVNARAER 313
           ++A+ ++ +  +
Sbjct: 319 LLAIFISRQRHK 330