Pairwise Alignments

Query, 297 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 290 a.a., LysR, substrate-binding (RefSeq) from Shewanella amazonensis SB2B

 Score =  169 bits (427), Expect = 9e-47
 Identities = 97/280 (34%), Positives = 163/280 (58%), Gaps = 5/280 (1%)

Query: 10  FIDVVDAEGFSAAARRIGKSKALLSKYVRELEDELGALLLNRTTRQFSLTEAGHTYYRSA 69
           F+ V +A+ F+AAA R+G S A +S+ VRELE+ LG+ LL RTTR+ SLTE G  +YR  
Sbjct: 9   FVAVAEAQSFTAAAGRLGISTAQVSRQVRELEERLGSKLLYRTTRKVSLTEDGQLFYRHC 68

Query: 70  SEILKEIDNLADLVRANNSDLKGRLRITVPRTFVDADIGQSLIDFGKEHPELSLDIVSDD 129
            ++L  +D     V +  S+ +G +R+T P T+ +  +   ++ + ++ P++ +     +
Sbjct: 69  RQVLDGLDEAERAVSSLKSEPRGLIRMTAPVTYGEQYVMPIVLAYMQQFPQVEVQCELTN 128

Query: 130 RFIDLVEEGFDVAIRITRLEDSTLIARKLDDFQVLVCASPDFMAKAGPLGHPSELSKLPC 189
           + +DLV+ GFD+AIR+  L DS+++ARKL +    + ASPD++++ G     SELS+  C
Sbjct: 129 QQLDLVQGGFDLAIRLGVLPDSSMMARKLAERVQYLVASPDYVSRHGAPHSLSELSRHQC 188

Query: 190 ILDTNGRSYSSWRFVEKDGSPFTVSVSGQIEVNSPLAAARAAVSGIGVAVLPDFIARPKI 249
           +L     S   WRF +++G   ++ V G++  +S      AA++G+G+A LP +     I
Sbjct: 189 LLG----SLPFWRF-QEEGKLRSLKVKGRLSCSSGNTLLAAALAGMGIAQLPGYYVDEAI 243

Query: 250 AAGELVTFFDDFLPKDRGIYAIYPHRRYLPTKVRTFVDFL 289
             G L+     F     GI+ +YPH R L  K+   ++ L
Sbjct: 244 RDGRLLVLLKPFQEPKEGIWGLYPHNRQLSPKIGHLMNML 283