Pairwise Alignments

Query, 297 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 291 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  169 bits (429), Expect = 5e-47
 Identities = 99/283 (34%), Positives = 156/283 (55%), Gaps = 5/283 (1%)

Query: 7   IRAFIDVVDAEGFSAAARRIGKSKALLSKYVRELEDELGALLLNRTTRQFSLTEAGHTYY 66
           I  F+ V +AE F+ AA+R+  S A +S+ +  LE+ LG  L  RTTR+ SLTE G  YY
Sbjct: 7   ISEFVAVAEAENFTLAAQRLNVSTAHVSRQIGALENRLGTKLFYRTTRKVSLTEEGTIYY 66

Query: 67  RSASEILKEIDNLADLVRANNSDLKGRLRITVPRTFVDADIGQSLIDFGKEHPELSLDIV 126
           R   ++   ++     +       +G +++T P  + +  I   L DF  ++P +  ++ 
Sbjct: 67  RHCRQLQTGLEEAERAITDLKDSPQGLVKLTAPVAYGEKFIMPLLNDFMVQYPSVECNVD 126

Query: 127 SDDRFIDLVEEGFDVAIRITRLEDSTLIARKLDDFQVLVCASPDFMAKAGPLGHPSELSK 186
             +R +DL+E G+D+AIR+ +L DS+L+A+ L      V ASP ++ K G     SEL++
Sbjct: 127 LTNRTLDLIEGGYDLAIRLGKLADSSLMAKPLSSRTHYVAASPSYVEKYGEPHTLSELNQ 186

Query: 187 LPCILDTNGRSYSSWRFVEKDGSPFTVSVSGQIEVNSPLAAARAAVSGIGVAVLPDFIAR 246
             C++     +++ WRF+E  G      V G++  NS  A   AA+ GIG+  LPD+   
Sbjct: 187 HNCLIG----NHNYWRFIE-HGRERNFKVRGKLICNSGYALRDAALKGIGIVQLPDYYIE 241

Query: 247 PKIAAGELVTFFDDFLPKDRGIYAIYPHRRYLPTKVRTFVDFL 289
             I AG L++F D       GI+A+YP  R+L  KVR  VD+L
Sbjct: 242 EDIHAGRLISFLDTHREAKEGIWALYPQNRHLSAKVRVLVDYL 284