Pairwise Alignments

Query, 279 a.a., ABC transporter for N-Acetyl-D-glucosamine, permease protein 2 (from data) from Sinorhizobium meliloti 1021

Subject, 300 a.a., sugar ABC transporter permease from Herbaspirillum seropedicae SmR1

 Score =  345 bits (886), Expect = e-100
 Identities = 170/266 (63%), Positives = 216/266 (81%)

Query: 14  VHAALIAYTLIALFPVFLTIVNSFKSRNAIFREPLAVPTPETFSLIGYETVLKQGDFIGY 73
           VH  L  Y +IALFP+ L ++NS K+RNAIF  P+A+PT ET +  G++ VL    F+ Y
Sbjct: 35  VHTVLCLYAVIALFPIALILINSVKTRNAIFEGPMALPTAETLTFAGFQKVLAGTHFLLY 94

Query: 74  FQNSIIVTVVSIALVLLFGAMAAFALSEYRFRGNTLMGLYLALGIMIPIRLGTVAILQGM 133
           F NS+ VTV ++ L++LFGAMAA+AL+EYRF GN  +  ++A+GIMIPIRLGTV+ILQ +
Sbjct: 95  FGNSLAVTVAALFLIVLFGAMAAWALTEYRFFGNRALNFFIAIGIMIPIRLGTVSILQLV 154

Query: 134 VATGLVNTLTALILVYTAQGLPLAVFILSEFMRTVSDDLKNAGRIDGLSEYAIFLRLVLP 193
           VA  L+NT TAL+LVYTAQGLPLAV ILSEFMR +  +LK+A R DG+ E +IF R++LP
Sbjct: 155 VALDLINTRTALVLVYTAQGLPLAVMILSEFMRQIPGELKDAARCDGVGELSIFFRVILP 214

Query: 194 LIRPAMATVAVFTMIPIWNDLWFPLILAPAEATKTVTLGSQIFIGQFVTNWNAVLSALSL 253
           L+RPA+ATVAVFTMIP WNDLWFPLILAP E T+TVTLG Q FIGQ+ T+WN+VL+ALS+
Sbjct: 215 LLRPAIATVAVFTMIPAWNDLWFPLILAPGEDTRTVTLGVQQFIGQYATDWNSVLAALSM 274

Query: 254 AIFPVLVLYVIFSRQLIRGITAGAVK 279
           A+ PVL+LY+ FSRQLIRG+T+GAVK
Sbjct: 275 AVIPVLLLYMAFSRQLIRGLTSGAVK 300